Gene CHU_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3784 
SymbolbglX 
ID4184120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4375611 
End bp4377848 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content45% 
IMG OID638073770 
Productb-glucosidase, glycoside hydrolase family 3 protein 
Protein accessionYP_680359 
Protein GI110640149 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.299854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC TGTATTTTTT CACCGGAATA TTTTTTCTTT CTGTTACCTG CGTTGCGCAA 
ACAGACAGCA TCGAAAATAA AATTCATGCC TTGGTTAAAA AAATGAGCCT GGACGAGAAG
ATCGGACAGA CATGCCTGAA AGGAACCTCA AGCAGAAGCA AGGGTTTGTC GGAAGAGTTA
AAAGAGCAGG TGCGCAAAGG ACTGGTTGGC GCTATTCTGA ATCTTACGGA TACAGCGCTT
GTGTTGCAGA TTCAGCGGAT TGCAGTGGAA GAAAGTCCGA ACCACATCCC GTTGTTATTT
GGCCGCGATG TGATCCATGG GTATAAAACA ATTTTTCCTA TTCCCCTTGG CCTGGCGGCA
AGCTGGGATT CAGTGCTTGT AGAAAAGACA GCCATGATTG CTGCACAGGA GTCGTATTCA
AGATGCATCA ACTGGACATT CGCACCCATG GTCGATATCT GCCGTGATGC GCGCTGGGGA
AGGATTGCAG AGTCGCCGGG AGAAGATCCG TACCTGGCGT CTGTTCTTGC ACGCGCGTAC
ATCAACGGTT TTCAGGGCAA CAATCCTGCT CAACCGGGCC GTATTCTTGC GTGTTCCAAA
CATTTTGCCG CTTACGGTGC TGCCGAAGGC GGGAGAGATT ACAATACCGT AAGCATGTCC
CGGAGTACCT TGTGGAACAT GTATCTGAAG CCATTCCATG CTTCCGTACA GGCAGGAGCT
GCTACCTTCA TGACTTCCTT CAATGATCTT AACGGTGTTC CTGCTTCAGG TAATGCATAT
TTATTAAAAG ACGTATTGCG GAACCAATGG AAGTTTCCAG GGTTTGTAGT AAGCGACTGG
AATTCGGTAA CGGAGATGAT TACGCACGGA TATTGTACCG ATGAAAAAGA TGCAGCCCTG
AAAGCCTTCT CAGCCGGGCT TGATATGGAA ATGACGAGTC AGGCATATGC GCATCATTTA
AAAACACTTA TTGCTGAAAA AAAAATTACG GAACAGCAAC TGGATGAACT GGTAAAAAAT
ATTCTGCGGA TAAAATTATA CGCAGGTATT TTTGAAAATC CATATTTTAA AGAAAAAGAA
AAATTTACAT TGCTGGATTC AGCAGCACTG ACGCTTGCAA AAAAATCGGC CGTTAAAAGT
TTTGTACTGT TAAAGAATCA CAACAATACC TTGCCGCTTG CAGCAACTAA AAAAATAGCC
GTTATTGGTC CGCTGGCCGA AGCACCTAAA GAACAGTTAG GCACCTGGAT TTTTGATGGA
GACAAGACCA ATTCACAAAC ACCGTTAGCG GCATTGAAAA AAATGTATGG TGCGGAAAAT
ATAAAATATG TACAAGGTTT AACCCATAGC CGCGACGAAT CTCATGATGA TTTTAACGCT
GCTTATAAGG CGGCAAAGAA GTCGGATGTA GTCTTGTTTT TTGCAGGTGA AGAAGCAATT
CTTTCGGGCG AGGCACATTC GCGGGCTGAT ATCCGCTTAC CCGGTGCACA GGAAAGATTA
ATCCGTAAAC TACATAAAGC AGGCAAGCCG ATTGTGTTGG TTATTATGGC CGGCCGGCCG
ATTACAATTG AACATATACT GCCCAATGTT TCTGCCGTAG TAATGGCCTG GCATCCCGGT
ACCATGGCGG GACCCGCGCT TGCAGATGTA TTGAGCGGAA AAGAAAATTT CTCCGGAAGG
CTTCCTGTTA CCTGGCCCAA AACAGTAGGG CAGATTCCCA TTTATTATAA TCACACAAAT
ACCGGCCGGC CGGCCGATTC CGTTTCGTTT GTTGGTATAA AAGATATTCC GATTGAAGCG
TGGCAAAGTT CACTGGGCAA CAACTCACAT TACCTGGATG CTGGATATAC ACCGCAATAC
CCATTCGGAT ATGGCTTGTC GTACACAAAA TTTGTTTGTA CAAACAGTTC CATCGAAAAA
AATACACTTA CAGTTAAAGA TAGTTTGATT GTAACACTGT CGGTTTCAAA TGCAGGTAGC
CGCAGTGGTA TAGAAACAAT ACAGCTATAT GTGCAGGATG TAACAGCAAG TCTGGTGAGG
CCGGTTAGAG AGTTGAAAGC ATTTGCTCAG GTTGAATTAA AGGCTGGAGA AACAAAAACA
GTTCGGTTTG CAGTAGCAGT ATCGGAGTTG GGTTTTTATA ACAATGAAGG CATTTATGTT
ATTGAACCCG GAGCCTTTAA TCTGTGGGTC GCACAAGATG CTGCAGGCGG CATGAAACAA
TCCTTTGAAA TAAAATAA
 
Protein sequence
MKHLYFFTGI FFLSVTCVAQ TDSIENKIHA LVKKMSLDEK IGQTCLKGTS SRSKGLSEEL 
KEQVRKGLVG AILNLTDTAL VLQIQRIAVE ESPNHIPLLF GRDVIHGYKT IFPIPLGLAA
SWDSVLVEKT AMIAAQESYS RCINWTFAPM VDICRDARWG RIAESPGEDP YLASVLARAY
INGFQGNNPA QPGRILACSK HFAAYGAAEG GRDYNTVSMS RSTLWNMYLK PFHASVQAGA
ATFMTSFNDL NGVPASGNAY LLKDVLRNQW KFPGFVVSDW NSVTEMITHG YCTDEKDAAL
KAFSAGLDME MTSQAYAHHL KTLIAEKKIT EQQLDELVKN ILRIKLYAGI FENPYFKEKE
KFTLLDSAAL TLAKKSAVKS FVLLKNHNNT LPLAATKKIA VIGPLAEAPK EQLGTWIFDG
DKTNSQTPLA ALKKMYGAEN IKYVQGLTHS RDESHDDFNA AYKAAKKSDV VLFFAGEEAI
LSGEAHSRAD IRLPGAQERL IRKLHKAGKP IVLVIMAGRP ITIEHILPNV SAVVMAWHPG
TMAGPALADV LSGKENFSGR LPVTWPKTVG QIPIYYNHTN TGRPADSVSF VGIKDIPIEA
WQSSLGNNSH YLDAGYTPQY PFGYGLSYTK FVCTNSSIEK NTLTVKDSLI VTLSVSNAGS
RSGIETIQLY VQDVTASLVR PVRELKAFAQ VELKAGETKT VRFAVAVSEL GFYNNEGIYV
IEPGAFNLWV AQDAAGGMKQ SFEIK