Gene CHU_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3527 
Symbol 
ID4183550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4083139 
End bp4083546 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID638073514 
Producthypothetical protein 
Protein accessionYP_680103 
Protein GI110639893 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.555314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA AACCATCAAG TGCTTTTATT GGTGCATCCT GGGTAGCGCT CGGAGCAGGA 
TTGATCGGAT ATTTGATCGG CTTATGGCGG TCAGATATGA TGTTGAGTGA AAAAGGGTAT
TACTTTACTG TACTTATGTA CGGTTTGTTC TCCGTAGTAT CTTTACAAAA AGCGGTACGC
GACCGGCTGG AAGGTGTTCC GGTAACCGAT ATCTATTTTG GTTTGGCCTG GTTTTCAAGT
CTGCTTTCCA TACTGCTGCT TGGGGTTGGT TTATGGAACG CCGCGCTCCT GCCCAGTGAA
AAGGGCTTTT ACGCCTTCTC TTTTTTGCTG GCACTTTTTG CTGTTATTAC CGTGCAAAAA
AACACCCGCG ACAATCAGTC TTTTAAAAAG TCAGATACAG CGGAATAG
 
Protein sequence
MNQKPSSAFI GASWVALGAG LIGYLIGLWR SDMMLSEKGY YFTVLMYGLF SVVSLQKAVR 
DRLEGVPVTD IYFGLAWFSS LLSILLLGVG LWNAALLPSE KGFYAFSFLL ALFAVITVQK
NTRDNQSFKK SDTAE