Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3527 |
Symbol | |
ID | 4183550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4083139 |
End bp | 4083546 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638073514 |
Product | hypothetical protein |
Protein accession | YP_680103 |
Protein GI | 110639893 |
COG category | [S] Function unknown |
COG ID | [COG4682] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.555314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAA AACCATCAAG TGCTTTTATT GGTGCATCCT GGGTAGCGCT CGGAGCAGGA TTGATCGGAT ATTTGATCGG CTTATGGCGG TCAGATATGA TGTTGAGTGA AAAAGGGTAT TACTTTACTG TACTTATGTA CGGTTTGTTC TCCGTAGTAT CTTTACAAAA AGCGGTACGC GACCGGCTGG AAGGTGTTCC GGTAACCGAT ATCTATTTTG GTTTGGCCTG GTTTTCAAGT CTGCTTTCCA TACTGCTGCT TGGGGTTGGT TTATGGAACG CCGCGCTCCT GCCCAGTGAA AAGGGCTTTT ACGCCTTCTC TTTTTTGCTG GCACTTTTTG CTGTTATTAC CGTGCAAAAA AACACCCGCG ACAATCAGTC TTTTAAAAAG TCAGATACAG CGGAATAG
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Protein sequence | MNQKPSSAFI GASWVALGAG LIGYLIGLWR SDMMLSEKGY YFTVLMYGLF SVVSLQKAVR DRLEGVPVTD IYFGLAWFSS LLSILLLGVG LWNAALLPSE KGFYAFSFLL ALFAVITVQK NTRDNQSFKK SDTAE
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