Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3500 |
Symbol | |
ID | 4183894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4051735 |
End bp | 4052136 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638073487 |
Product | anti-sigma regulatory factor |
Protein accession | YP_680076 |
Protein GI | 110639866 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.314034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCCT TGCGCATACA GATCCCTTCA TTAGTAGAAA ACATTCGCAT CGTTGAAAGT TTTATTGATA ATGTTAAAGA CACGTTTGAA ATAGATGATG ATATCTATGG CAACATAATG GTTGCTATTA CTGAGTCAGT AAACAATGCT ATCCGACACG GTAATAAAGA AGACAATAAA AAGAACGTTA CATTAACGGC TTCCTGTACA GAGAATGTAT TGGTATTTAC TGTTGAAGAC GAAGGCCCGG GTTTCAATCC TGATACACTT CCTGATCCGA CTGCTCCAGA AAACATTGAA AAAGTAGGCG GAAGAGGAAT CTTTTTGATG AAGCATCTAG CCGATGAAGT TAAGTTTTCA AATGAAGGAC GTAAAGTAGA GTTAACCTTT TTTAATAATT AG
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Protein sequence | MESLRIQIPS LVENIRIVES FIDNVKDTFE IDDDIYGNIM VAITESVNNA IRHGNKEDNK KNVTLTASCT ENVLVFTVED EGPGFNPDTL PDPTAPENIE KVGGRGIFLM KHLADEVKFS NEGRKVELTF FNN
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