Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3437 |
Symbol | |
ID | 4185370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3926480 |
End bp | 3933745 |
Gene Length | 7266 bp |
Protein Length | 2421 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638073426 |
Product | hypothetical protein |
Protein accession | YP_680015 |
Protein GI | 110639805 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGATTA AATCTGTATC GAAAATGAAA AAAAATACTC TCGGATTAAA AATAATCATT CAATTAGTAA TAGTTTTTCT TTCTATTCAT ACTAATGCAC AGATTTTAGT TTCCGGTACG GACTTCGATC CTTCACCAGG AAATGCTTCA AGATTTTATA TTGGATTAGA TGATATAACT CAAATAGGTT TTCAAAATGG AAGTATAACA TCCACTCCTC CATTAGCTAC CAATGTAAAT CCCAATATAT TTAATGTTGG GTATTTATAT GCCGTTACAC CAACACCCAT TCGCTTAGAT AGTACGCGTT ATCAGAACTT TATCCCTGTT GATTATTCAT ATGTATACGC ACCACCAGCC TCAAGTGGTG GTAATCTTAA CATTTTGCAA TATTCACTTA CAGGTTTAGT TCCTAATTCA AGTGTTTCCG TTATTGTTGA TTATTGCAGT GCGGTAAAAT CTACGTATGC ATCTTGTACG GGTCAGCGGA ATGAATTTAA AGCAGGCATT AATTTAGATG CAAGTAACCA ATTGTTTGGT AATGATGTAA CCCAGATAGG TATGGGTGAA TGCAGAAGTG CAACAATAAC GGGTACTGTA GATGCTGGAG GAAATATGGT ATTCAGAATG AACAATACCA GATTTGGTTC ATGCCAGGCG ATGGCTATCA AAAAGATTGC GATAATGGGT TTTCCTCAAC CGGCAATTAT TTCTACTTCA GGAACAGAAG TTTGTGCAGG TGAGCAGATT ACTGTACAGA CAACATCTAC CTATAATGCA ACGTATCAAT GGCAGGTGGA TAATGGATCC GGAACATTTA CCAGTATTGC TGGTGCAACA AACCAGGCAT TGTTATACGA GGTTGGAACA ACACCGGCTA CATATAAATT CAGATGTCTT GTTACTCCAT TACCTAGCGG AACGGCAATA GCTTCTAATG TGGTTCAGAT AAAATCAATA ACGTGCTGCC TTGATCCGGT TACAGGTGCC GGAACGTCAC GAAAAACTAT TTATTATGAT GATTTCGGAA CCCTGGATTT ATCGGATGCT ACTGGAAGGA CCTATAAAGT ATGGGATTAC ACAGATATAA CAAATCCGAA ACTCGTTACA AAAACGACAA CAACTCCTTT CCGGTGGACA TTAACTCCTG CTCCTTTGGG AGCAACTTTT AAGGCTACAG GCCCATTACA GGATGGAGAA TATGCTGTGG CATCTTACCT TACAGCTACA GCTGCAGATG GTGCTTATGC TGGTGCACAA CTGGATTGGG CAAACCGGGT AACCGGCCCG ACAACTCCGC CAAATGTTTC CTTAGATCAT TCCGGTACAA AAGCGGGAGG AGCGTTATTT ATAAACTGTC CGCCTAATAC TCAGGGACAG AAATTGTATA CACGCACCAT TCCTGATTTA TGTTTTGGAA AGCAATTGTA TTTTGAATGC TGGATTGCAG TATTTACAAA TGGTCCAGCT GGAGGTTGCC CTTCATACTC TCCTGTGGAT GTAACTATTA AATTAACAGA TGGATCAAAT ACAGCTAATA CATCTTCTGC AAATGCTACT GCTACAAGAC AGAGCGATGG CGGCGGCGTT TGGGTACGTG TAGCCGGCAA TATAACACTT GGTGCCGGAA GTACGTCTGT TATTATGGAT GTGATAAATA ATTCAAACCA ATATCTGTGC GGTAATGACC TTGTTATTGA TGATATCAAA ATTATGGCAT GTGCTCCGCC GCCCTTAGAT GTGTACTTTG ATATTCCTAC GATATCCACT AAGAAAGATG TGTGTACGGC AGCATTGGAT CTGAATTCAA AACCAAGCAC TCTTTTAAAA GCGTATTATA ATAATGCTCC GAAGTATTTA TATCAATGGA CTAAAACACC GGCGGATTAT ACTTCATGGA AAAACCTGGC TGTTCCGCCA CAATCCGGAG AAGTTTTTAC TATTGCAAAT CCTTCCTTAA ATGCAGCATA TACCGGAACA GTAAATGGCG ATAAAATTTA TTTCAGAGTA ATCGCCGCTA CAGATGCTGT ATTTACTTCC AATAATAATT TTACAGCGCC TAAGTATGCG AATGATAATG ATCCGTGTAA AAATTATTCG GTTTCAAACA TAATCGAGTC TACTGTTAAA TGTCCGAGCT GCACGAAACC ATCTGCAGTA ACGATCACGA CCCCGTCTAC GGGTACGGTA ACGCTTTGTC AGGGTACGGC TCAGAATTTA ATCGGCAGAG CAACAGTAAC AGCAGCAGCT CAGAATACAA ACTTCACGTA TTCGTGGATC AAGGTTTTAC CAACCCCTGT AACTACCCCG GTTGCAGCAA CGGTAATTGC GCTTCCGGCC AATACCCCTA CGTCTACGCC GGCGTTTGCC TTAACGGGCG CGTTAGCGGA TGCAGGTACC TATACCTTAC GCGTTGAAGA CGGAAGCGCA GGTAATGCAG CCTGTTATAC AGAGGCGAGT GTGGTAGTTG TTGTTGACCC TGTAGTAACA GCAGCGACAA TTTCAACGGC ACAGACCATC TGTTCGGGCA CAGCTCCTGC ACAGATGGGC GGCGCGGTAG CAGCAGGCGG TTCAACAACG GCCACAGCCA GTTATGTATG GGAAAGTTCA GCAAACGGAA CAAGTGGCTG GACAACTGTT TCAGGTGCAA CGTTAAAAGA CTATACACCG GGAACACTTA CAGCAGATAC GTATTACAGA AGAACGGATA AAAAAGGAGC ATGTACAGGT GTTGCATCGA ATGTGATAAA AATCACGGTT GACCCTGTAG TAACGGCAGC GACAATTTCA ACGGCACAAA CCATCTGTTC GGGCACAGCT CCAGCCCAGA TCGGCGGTGC TGTAGCAGCG GGCGGTTCAA CAACGGCCAC AGCCAGTTAT GTATGGGAAA GTTCAGCAAA CGGAACCAGT GGCTGGACAA CTGTTTCAGG TGCTGCGTTA AAAGACTACA CACCGGGAAC ACTTACCGCA GATACGTATT ACAGAAGAAC GGATAAAAAA GGTGTATGTA CAGGCGTTGC ATCGAATGTG ATAAAAATCA CGGTTGACCC TGTAGTAACG GCAGCGACAA TTTCAACGGC ACAGACCATC TGTTCGGGCA CAGCTCCTGC ACAGATCGGC GGTGCTGTAG CAGCAGGCGG TTCAACAACG GCCACAGCCA GTTATGTATG GGAAAGTTCA GCAAACGGAA CCAGTGGCTG GACAACTGTT TCAGGTGCTG CGTTAAAAGA TTACACACCG GGAACACTTA CCGCAACAAC ATATTACAGA AGAACAGATA CAAAAGGCGT TTGTCCTGCC GCTGTTTCCA ATGTTATTCA GATCACGGTT GACCCTGTAG TAACAGCAGC GACAATTTCA ACGGCACAGA CCATCTGTTC GGGCACAGCT CCAGCCCAGA TCGGCGGCGC TGTTGCAGCA GGCGGTTCAA CAACGGCCAC AGCCAGTTAT GTATGGGAAA GTTCAGCAAA CGGAACAAGT GGCTGGACAA CTGTTTCAGG TGCAACGTTA AAAGACTATA CACCGGGAAC ACTTACAGCA GATACGTATT ACAGAAGAAC GGATAAAAAA GGAGCATGTA CAGGTGTTGC ATCGAATGTG ATAAAAATCA CGGTTGACCC TGTAGTAACG GCAGCGACAA TTTCAACGGC ACAAACCATC TGTTCGGGCA CAGCTCCAGC CCAGATCGGC GGTGCTGTAG CAGCGGGCGG TTCAACAACG GCCACAGCCA GTTATGTATG GGAAAGTTCA GCAAACGGAA CCAGTGGCTG GACAACTGTT TCAGGTGCTG CGTTAAAAGA CTACACACCG GGAACACTTA CCGCAGATAC GTATTACAGA AGAACGGATA AAAAAGGTGT ATGTACAGGC GTTGCATCGA ATGTGATAAA AATCACGGTT GACCCTGTAG TAACAGCAGC GACAATTTCA ACGGCACAGA CCATCTGTTC GGGCACAGCT CCTGCACAGA TCGGCGGTGC TGTGGCAGCA GGCGGTTCAA CAACGGCCAC AGCCAGTTAT GTATGGGAAA GTTCGGCAAA CGGAACCAGT GGCTGGACAA CTGTTTCAGG TGCTGCGTTA AAAGATTACA CACCGGGAAC ACTTACCGCA ACAACATATT ACAGAAGAAC AGATACAAAA GGCGTTTGTC CTGCCGCTGT TTCCAATGTT ATTCAGATCA CGGTTGACCC TGTAGTAACA GCAGCTGTTA TTTCATCCGA CCAGTCAATC TGTTCAGGCG CAGCACCCTC TCAGATCGGC GGCGCGGCAG CAGCAGGAGG TTCAACTACT GCCACGGCAG GTTATGTATG GGAAGTATCA ACAACCTCAG CGAGCGCGGG CTTCAGCGCA ATTTCAGGGG CTACATTAAA AGACTATACA CCGGGTACCT TAACAGTTGA TACCTGGTAC AGAAGAGTTG ATAAGAAAGG TACATGCGCG GGAGTAGCTT CGAATGCGGT TAAGATTTCT ATTGTAGCAG TAGCACCAGC TACCGTATCG TTATCCCGGT TACCATCTGG CCCGATCTGC GAAGGTACCA ATGTTACCTT TACGGCCAGC GTTGGCAACG GCGGCACACC TGCTTATGTA TGGACATCCT CTGTAACGGG TGCGTTGGCT TCAACCACAG ATACGTATTC AAGCACAACG CTTGTAGACG GAGAAGTTAT CACCGTTGAT ATTACCAGCA GCTTAAGCTG TGCGAACCCG AAAACAGCGA CAGCGAGTTC TACGATGGTT GTGAATACAA AAGTAACGCC AACGATATCG ATCACAGCAG ACAAGACAAC GATCTGTCCG AGTGAGAGTG TAACCTTCAG CATCACAGCC CAGACCAATC AGGGTACAGC TCCTGCCGGC CCAACGTACC AGTGGCAGAC CAATAAGAGC GGTACTTACC AGAATATTTC AGGAGCGACA AACAGCACAT ATATAGCCTC TTCGGTTACC AATGGGGAAT CGTTCCGTGT AGTAATGACA ACAGGCTTAA CGTGTGTAAC GTCAGCTACC GCCGTCTCCA CACCGGTAGC CGTTACGGTT ACCCCTGTAC CGACCTTATC GGTAAGCATT GCAGCTGATA AGGCCACGAT CTGTTCAGGT AATGCGGTTC AGTTTACCGC TACCGCAACG GGTTCAGGCT CCACACCTGC GCCAACGTAT GAGTGGTTCA TCGGAGCGGC AGGTTCAGAA ACCAGCCAGG GAGCAGGTTC CACCACGGCG AACCCGTACA GCACAACATC GTTAACGACC ACAGCAGCGT TAAGCCCTCA GACCTACAGC ATTTATGTAA GAGCGACCAG CAATGCAACC TGCGCGAGCA CCACTCCGGC ACAGTCCGCA GCGGTCACTG TTACGGTAAA TGCCGGAGTT GGCGCGGGAA CAATCACAAC AACGTTATTA ACGATCTGCA ACAACACCGT TCCCGGTGCG ATTACTGAAG CAAGCGCTGC CAGCGGAGGC ACTTCCCCGA CCTATACGTG GGAAGAATCC ATTGACAACG GGGCCTGGGG CCCTGCCACA GGCACTGTAA GCGGTACGGG CTTTACACCG AGCGGCGCCA AAACAGGCAC CAAAGTATCC TACAGAAGAA TTGTAACCTA TACAAGCATC CCGGCTCCAT GCAACACAGC CATGAGCAAC ATTATCGACA TCACGGTTAA CCCTGCTTTA GTGGCCGGCG TTATCCAGGA TGATCAGATA ATCTGTTCAG GATTGGTTCC GGCAGCGCTT ACCCAGGTAA GCGCGCCAAC AGGCGGTACA GGCAGCTATA CCTACCAGTG GCAGAGCAGC ACCACAGGCA CAGCCGGTTC GTTCAGCAAT ATTGGCGGAG CCACCACATC TGGCTATGCA CCGGGCGCAT TAACGGCAAC CACCTACTAC CAGCGCGTGG AAACGTCCGG CACATGCGGG AGTGTCACCG GCAATATGGT AACCATCACC GTATCGACCC CCGAAGTAGT AACAGCCCAG ATCAACGATC CGGGTCAGGT ATGCGAGGGT TCAGTGCCGA TGGTGTTTAC GGCCACCACA ACGGGATCCG GTACCTTAAC GTATGCCTGG ACACTTGACG GAGCACCGGT AGGCACCAAC AGCAGTACAT ACAGCTATAA CCCAACCACA GCATCCGATG CAGGCAAAAA AGTAAAAGTA GTTGTAACGA CCTCAATCGG CTGTAATGCC GGTCCTGGTA TCTCCAATGA AGTAGCCCTG AATATTGTTG TATCAAGCAT GCCTTCGGTA AGCATCACGG GAGCGCCTGC GGTACAGTGT TCCGGTTTAC CGGTCCGCTT TACGGTAAGC AATACCACAG CCGGTGGCAA CAATCCGACC TACCAGTGGT TCATCGAATC ACAGGCAGGT GTAGCCACCG CAGTAAGCGG GGCAACCAAT ACAAGCTTTA CCAGCACAGG CTTAACTGCC GGGGATAAGG TGTATGTGGA ACTTACTTCC AATCTTGGCT GCGCACTGGG TACCAACCCG CACGCTTCCA ATAAGATCGC ACCAGCGATC CTTGCTACAC CGGCTCCGGT GATCAATGAG ACACCGCTTC CGATCTGCAG CCCGGAAGGG TTTGAGTTCA CCGCTGTAGT AGGAAGTGCA ACGCCTCCAA ATACGCTGCA GTGGTATAAG GATGGCGTAG CGATAAGCGG AGCAACCACA AGCATCTATA AAGCCTTTGA AAGCGGACTT TATTCGATAG AGGAAAGCAA TGCAGCGTGC GGCACGATCT CCACGGAAGT ACCGCTTACC GTAATCCAGA CGCCGGTAGC CAATGCGGGT TCAGATATCA CGGTAAAAGA AGGAGAGCAG GTAACGCTGA ACGGCAGCGG GGGAGTAATC TACAGCTGGA GCCCGGATAC GGGTCTTGAT GATGCCAGTT CAGCCACTCC GAAGTTAACA GCTGATAAGA CAATCATGTA TATCTTAACG GTTCGTGATG CCACAGGCCA GTGCCATGAT GATGATGAAG TAATGGTGTT TGTGGAGCGT CCGATCAAGG TACCCAATGT AATAACAGTA AACGGGGATG GAGTGAACGA TACCTGGGAG ATTGAGAACA TCGAGAGCTT CCCCAATGCC GAGTTCCTGA TCTACAACCG CTGGGGGAAC CTGGTGTGGA AGAGCACAGG GTATCCCAAG GAGTGGGATG CGACCAACTT CCGCAACGGG GAAGTATTGC CTGACGGTAC CTACTTCTAC ATCATCGACC TGCACAGCAC CATCTATACA GAAGCGTACA CCGGGTATAT ACAGGTTGTG AAATAA
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Protein sequence | MWIKSVSKMK KNTLGLKIII QLVIVFLSIH TNAQILVSGT DFDPSPGNAS RFYIGLDDIT QIGFQNGSIT STPPLATNVN PNIFNVGYLY AVTPTPIRLD STRYQNFIPV DYSYVYAPPA SSGGNLNILQ YSLTGLVPNS SVSVIVDYCS AVKSTYASCT GQRNEFKAGI NLDASNQLFG NDVTQIGMGE CRSATITGTV DAGGNMVFRM NNTRFGSCQA MAIKKIAIMG FPQPAIISTS GTEVCAGEQI TVQTTSTYNA TYQWQVDNGS GTFTSIAGAT NQALLYEVGT TPATYKFRCL VTPLPSGTAI ASNVVQIKSI TCCLDPVTGA GTSRKTIYYD DFGTLDLSDA TGRTYKVWDY TDITNPKLVT KTTTTPFRWT LTPAPLGATF KATGPLQDGE YAVASYLTAT AADGAYAGAQ LDWANRVTGP TTPPNVSLDH SGTKAGGALF INCPPNTQGQ KLYTRTIPDL CFGKQLYFEC WIAVFTNGPA GGCPSYSPVD VTIKLTDGSN TANTSSANAT ATRQSDGGGV WVRVAGNITL GAGSTSVIMD VINNSNQYLC GNDLVIDDIK IMACAPPPLD VYFDIPTIST KKDVCTAALD LNSKPSTLLK AYYNNAPKYL YQWTKTPADY TSWKNLAVPP QSGEVFTIAN PSLNAAYTGT VNGDKIYFRV IAATDAVFTS NNNFTAPKYA NDNDPCKNYS VSNIIESTVK CPSCTKPSAV TITTPSTGTV TLCQGTAQNL IGRATVTAAA QNTNFTYSWI KVLPTPVTTP VAATVIALPA NTPTSTPAFA LTGALADAGT YTLRVEDGSA GNAACYTEAS VVVVVDPVVT AATISTAQTI CSGTAPAQMG GAVAAGGSTT ATASYVWESS ANGTSGWTTV SGATLKDYTP GTLTADTYYR RTDKKGACTG VASNVIKITV DPVVTAATIS TAQTICSGTA PAQIGGAVAA GGSTTATASY VWESSANGTS GWTTVSGAAL KDYTPGTLTA DTYYRRTDKK GVCTGVASNV IKITVDPVVT AATISTAQTI CSGTAPAQIG GAVAAGGSTT ATASYVWESS ANGTSGWTTV SGAALKDYTP GTLTATTYYR RTDTKGVCPA AVSNVIQITV DPVVTAATIS TAQTICSGTA PAQIGGAVAA GGSTTATASY VWESSANGTS GWTTVSGATL KDYTPGTLTA DTYYRRTDKK GACTGVASNV IKITVDPVVT AATISTAQTI CSGTAPAQIG GAVAAGGSTT ATASYVWESS ANGTSGWTTV SGAALKDYTP GTLTADTYYR RTDKKGVCTG VASNVIKITV DPVVTAATIS TAQTICSGTA PAQIGGAVAA GGSTTATASY VWESSANGTS GWTTVSGAAL KDYTPGTLTA TTYYRRTDTK GVCPAAVSNV IQITVDPVVT AAVISSDQSI CSGAAPSQIG GAAAAGGSTT ATAGYVWEVS TTSASAGFSA ISGATLKDYT PGTLTVDTWY RRVDKKGTCA GVASNAVKIS IVAVAPATVS LSRLPSGPIC EGTNVTFTAS VGNGGTPAYV WTSSVTGALA STTDTYSSTT LVDGEVITVD ITSSLSCANP KTATASSTMV VNTKVTPTIS ITADKTTICP SESVTFSITA QTNQGTAPAG PTYQWQTNKS GTYQNISGAT NSTYIASSVT NGESFRVVMT TGLTCVTSAT AVSTPVAVTV TPVPTLSVSI AADKATICSG NAVQFTATAT GSGSTPAPTY EWFIGAAGSE TSQGAGSTTA NPYSTTSLTT TAALSPQTYS IYVRATSNAT CASTTPAQSA AVTVTVNAGV GAGTITTTLL TICNNTVPGA ITEASAASGG TSPTYTWEES IDNGAWGPAT GTVSGTGFTP SGAKTGTKVS YRRIVTYTSI PAPCNTAMSN IIDITVNPAL VAGVIQDDQI ICSGLVPAAL TQVSAPTGGT GSYTYQWQSS TTGTAGSFSN IGGATTSGYA PGALTATTYY QRVETSGTCG SVTGNMVTIT VSTPEVVTAQ INDPGQVCEG SVPMVFTATT TGSGTLTYAW TLDGAPVGTN SSTYSYNPTT ASDAGKKVKV VVTTSIGCNA GPGISNEVAL NIVVSSMPSV SITGAPAVQC SGLPVRFTVS NTTAGGNNPT YQWFIESQAG VATAVSGATN TSFTSTGLTA GDKVYVELTS NLGCALGTNP HASNKIAPAI LATPAPVINE TPLPICSPEG FEFTAVVGSA TPPNTLQWYK DGVAISGATT SIYKAFESGL YSIEESNAAC GTISTEVPLT VIQTPVANAG SDITVKEGEQ VTLNGSGGVI YSWSPDTGLD DASSATPKLT ADKTIMYILT VRDATGQCHD DDEVMVFVER PIKVPNVITV NGDGVNDTWE IENIESFPNA EFLIYNRWGN LVWKSTGYPK EWDATNFRNG EVLPDGTYFY IIDLHSTIYT EAYTGYIQVV K
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