Gene CHU_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3417 
Symbol 
ID4186290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3894974 
End bp3895993 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content40% 
IMG OID638073407 
Productleucine aminopeptidase 
Protein accessionYP_679996 
Protein GI110639786 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA ACAGATATAG TATTTTCAGG AATGCAATTT GTATTGCTGC AACAGCAGGG 
ATGTTGTTTG GTTGCGGGCC TGATAAGAAA CCGGTTGAAA AGGTTGCGGA AGAAGTCGTG
CTGCAACCCA TGGTAACACC TGACTTTAAC AGCGATTCTT CGTATGAATA TGTTTCCAGA
CAAGTGGCAT TCGGGCCAAG AGTACCGAAT ACAAAACCAC ATATGGATTG CGGTGAATAC
CTGGCAAAAT TTTTTACAAA GCATGGCGGC TGGGTTTACA GACAGCAGTT CTCTGCAAAG
GCTTTTGATG GAACGGATTT AAGACTGAAA AATATTATTG TATCCTACAA TCAAAAAGCT
ACAAAACGTA TCCTGCTTGC AGCACACTGG GATACACGCC CGTTTGCAGA CCAGGATGAA
GTTGACCCTA AGAAACCAAT TGATGGTGCT AACGATGGCG CAAGCGGTGT TGGAATTTTA
ATGGAGCTGG CTCGTGTAAT TAATCTTGCA GAAAAAAAAC CGGATGTGGG TTTTGATATC
ATTCTGTTTG ACGGAGAAGA TTATGGACAG CCAATGTATT ACCCGGGCCC GTATCAAAAC
GATAGCTGGT GCTTAGGTTC TCAATATTGG GCGAAGCACA AATTTCCGGC GAACTATTCT
GCTTACTATG GAATTTTGCT GGATATGGTT GGTGCAAAAG ATGCAACCTT TGCTAAGGAA
GGTGTATCGG TAGAAAATGC TCCTTCTGTG GTAAACAATG TATGGACAAC GGCTGCACGT
TTAGGTTATG GGAAGCATTT TATAAATGTT ATGAGCCAGC CAATCACAGA TGATCATACT
TACATCAATA AACTCGCGCT TATCCCGATG ATTGATATTA TTGAATATGA AAACAGTGAC
GATGTTTATT TTGGTTCATA CTGGCATACA CATAATGATA ATATGAATAT CATAGATAAA
AATACACTGA AAGCAGTAGG TCAAACATTA ATTGAAGTTC TGTACAGGGA AAAATTATAA
 
Protein sequence
MKNNRYSIFR NAICIAATAG MLFGCGPDKK PVEKVAEEVV LQPMVTPDFN SDSSYEYVSR 
QVAFGPRVPN TKPHMDCGEY LAKFFTKHGG WVYRQQFSAK AFDGTDLRLK NIIVSYNQKA
TKRILLAAHW DTRPFADQDE VDPKKPIDGA NDGASGVGIL MELARVINLA EKKPDVGFDI
ILFDGEDYGQ PMYYPGPYQN DSWCLGSQYW AKHKFPANYS AYYGILLDMV GAKDATFAKE
GVSVENAPSV VNNVWTTAAR LGYGKHFINV MSQPITDDHT YINKLALIPM IDIIEYENSD
DVYFGSYWHT HNDNMNIIDK NTLKAVGQTL IEVLYREKL