| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3352 |
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| Symbol | hsdS |
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| ID | 4185047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3831449 |
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| End bp | 3832360 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638073341 |
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| Product | type I site-specific deoxyribonuclease S subunit |
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| Protein accession | YP_679931 |
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| Protein GI | 110639721 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000513186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0100815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAATA TGGCAAAAGC TGGTAAAAAA AATACTAACG TTCCTAATTT GAGATTTCCT
GAGTTTGATG AGGAATGGGA AGAGAAAACG TTGGGGGAGA TCTGTGAAAT GCAAGCTGGA
AAATTCGTTA GTGCTAGTGA AATAAAAGAG CAGCATTTTG ACGGCTTATT TCCTTGTTAT
GGTGGAAATG GATTAAGAGG TTATACTAAA TCATATAATT ACGATGGTAA ATATTCCTTA
ATTGGTCGAC AGGGAGCATT ATGTGGCAAT GTAAATTTTG CTAATGGAAA ATTTCATGCA
ACAGAGCATG CAGTGGTTGT CACCCCGTTA AATGGCATTA ATACAGTTTG GATGTTTTAC
TTGTTAACAA ATTTGAATTT AAATCAATTT GCTACAGGCA TGGCCCAACC AGGACTATCT
GTACAAAATT TAGAAAAGGT TGAGAGTACA ATTCCTAAAG CTATAGATGA GCAAGAAAAA
ATTGCTTCTT TTCTAACGCT AATTGACGGA CGTATCTCAA CTCAAAACAA AATAATTGAG
GAGTTAAAGT TGTTAAAGAT TGTGGTCAGT CAGAAGATAT TTTCTAGACA ATTGCGACTT
AAGGATGATA AAGGAAAAGA ATTTTCAAAC TGGGAAATAA AGAAATTAGA AGAAATTTGT
GAAAAGAAAT CTTCTAGTAT TTCTGCAAAT AAAATAGAAA ATAATTTCGG GGAATATCTT
ATTTACGGAG CATCAGGGAT TTTAAAGAAG GTTGATTTTT ACGAAGAAGA AAATGATTAT
GTCAGTATTG TAAAAGATGG TGCTGGAGTC GGTAGGCTTT TTTATTGTAA TGGTAGATCT
TCTGTTTTAG GAACAATGGA TATAGTAAAA CCCAAAGACA CAACAAGCGC TTATTTTTAT
TTTGTTTATT AA
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| Protein sequence | MTNMAKAGKK NTNVPNLRFP EFDEEWEEKT LGEICEMQAG KFVSASEIKE QHFDGLFPCY
GGNGLRGYTK SYNYDGKYSL IGRQGALCGN VNFANGKFHA TEHAVVVTPL NGINTVWMFY
LLTNLNLNQF ATGMAQPGLS VQNLEKVEST IPKAIDEQEK IASFLTLIDG RISTQNKIIE
ELKLLKIVVS QKIFSRQLRL KDDKGKEFSN WEIKKLEEIC EKKSSSISAN KIENNFGEYL
IYGASGILKK VDFYEEENDY VSIVKDGAGV GRLFYCNGRS SVLGTMDIVK PKDTTSAYFY
FVY
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