Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3318 |
Symbol | |
ID | 4186688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3790163 |
End bp | 3790540 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073310 |
Product | transposase |
Protein accession | YP_679900 |
Protein GI | 110639690 |
COG category | [S] Function unknown |
COG ID | [COG2764] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAC CATCCGAATA TCTGCCCGTC ATGCCGTATC TTATTTTAAA AGATTCGAAA GGATTTTTAA CATTTGCGAA AGAAGTTTTT GGTGCAACGG AACAGATGAT TGTTCCCGCA GAAGACGGCA GCATCATGCA CGGCGAAATA AAAATTTTTG ATGCCGTGAT TATGTTTGCA CAGGCGGGAG ACAGCTGGAA AGAAAAACCT GCCGGCATGT ATATTTATTT GCTGGAAGTA AATGCGGTGT ATGAAAAAGC ACTTGCAAAA GGTTCAATAA ATTTAATGCC TCCGGATAAA AAAGAATACG GCTACACAGC AGGTTTTGAA GATCCGTTCG GTAACCAATG GTGGATCGTA GAAGGAGAGA AAGATTAA
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Protein sequence | MKIPSEYLPV MPYLILKDSK GFLTFAKEVF GATEQMIVPA EDGSIMHGEI KIFDAVIMFA QAGDSWKEKP AGMYIYLLEV NAVYEKALAK GSINLMPPDK KEYGYTAGFE DPFGNQWWIV EGEKD
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