| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3289 |
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| Symbol | lysA |
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| ID | 4184793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3760708 |
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| End bp | 3761940 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073281 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_679871 |
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| Protein GI | 110639661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.721852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTAA CAAACCGCAC GTACGAATTT CAAGGAGTTT CCCTGACTGA ATTAGCAACC
GAATATGGCA CGCCATTGTA TGTTTATAAC AGTGAAAAAA TACTTTCTCA ATATAAACGG
TTACACGATG CTTTTTCAGG CGTGAATGTG CGCATTAAAT ATGCAGCGAA AGCATTAACC
AATCAGGCCA TTTTAAAATT ATTAAAAGGT GCCGGTGCAG GAGTAGATGT TGTTTCCATT
CAGGAGCTGC AACTGGCGCT AAAGGCTGGT TTTGATAAAA AGGACATTAT GTTCACGCCA
AACTGTGTTG ATTTTTCAGA AATTGAAGAA GCAGTAGGGT ATGGTGTTCA GATAAACATT
GACAACATTC CGTTCTTGAA ACAATTCGGC CAAGTTTATG GGAGCAGCGT TCCATGCTGT
GTACGCATCA ATCCGCATAT TGATGCCGGA GGAAATGTTA AAATCATGAC CGGTCACAAA
GGTTCTAAAT TTGGAATCTC CATTGAACAG GTGAATGAGA TCTATGAAGT AGTAGACGAA
TATGAAATCC TTGTAAACGG GGTACACGTA CACAGCGGAT CGGATTTCAA AAGTGCCGAT
GCATTTGTCC GCGCAGCTGA AGTTGTTTAT TCCGTAGCCA TGCAGTTTGA TAAACTTACG
TTTCTGGATT TCGGAAGCGG CTTTAAAGTT TCATACAAAG AAGGTGATTA CGTAACCGAC
ATTGAAGAGC TTGGTAAAAA AATGACAGAC TCGTTTAATG CATTCTGTTT AAACTATGGT
AAAAAATTAG ACATCTGGTT TGAACCGGGA AAGTTTTTAG TAAGTGAATC GGGCATGCTG
CTGGTTACGT GTACGGTGAT TAAGGAAACG CCTGCCTGTA ATTTCATTGG TGTTAACTCC
GGACTGAATC ACCTGATCAG ACCAATGATG TATGGCTCTC ACCATGACAT TGTGAATGTG
AGCAACCCGG ATGGCGATAA AAAAATGTAT ACCGTGGTAG GATACATTTG CGAGACGGAT
ACATTCGGTT CGGATTTATT TATTGAAGAA ACAAAAGCCG GTGATATCAT TGGTTTAAAA
AATGCAGGTG CATATGGATT CAGCATGAGT TCAAATTACA ACTCACGTTT CAGACCTGCC
GAAGTTCTTG TTCATAAAGG CAAACATCAG TTGATTCGTA AACGCGAAAC GATGGAAGAT
TTGTTAAAAA ATCAGATCGA TGTAGAATTG TAG
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| Protein sequence | MQVTNRTYEF QGVSLTELAT EYGTPLYVYN SEKILSQYKR LHDAFSGVNV RIKYAAKALT
NQAILKLLKG AGAGVDVVSI QELQLALKAG FDKKDIMFTP NCVDFSEIEE AVGYGVQINI
DNIPFLKQFG QVYGSSVPCC VRINPHIDAG GNVKIMTGHK GSKFGISIEQ VNEIYEVVDE
YEILVNGVHV HSGSDFKSAD AFVRAAEVVY SVAMQFDKLT FLDFGSGFKV SYKEGDYVTD
IEELGKKMTD SFNAFCLNYG KKLDIWFEPG KFLVSESGML LVTCTVIKET PACNFIGVNS
GLNHLIRPMM YGSHHDIVNV SNPDGDKKMY TVVGYICETD TFGSDLFIEE TKAGDIIGLK
NAGAYGFSMS SNYNSRFRPA EVLVHKGKHQ LIRKRETMED LLKNQIDVEL
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