| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3266 |
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| Symbol | uvrD |
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| ID | 4185278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3730788 |
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| End bp | 3733913 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073258 |
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| Product | DNA-dependent ATPase I and helicase II |
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| Protein accession | YP_679848 |
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| Protein GI | 110639638 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.951374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAA AAGCATCAAA ATACGATCTA CTTTTTCAGG AACAGCTGGC CAGGCTCAAC
ACTGCACAAC GTGAAGCAGT TGAAACCATT GAAGGTCCTG TGCTTGTAAT TGCCGGCCCT
GGCACCGGTA AAACACAGAT CCTTTCCGCA CGTATCGGTA AAATTCTGGC CTCACCTGAT
TTACAGGTGC AGCCGCATAA TATTCTCTGC CTTACCTTTA CCGAAGCCGG TACAGTTGCC
ATGCGCAAGC GCTTACTTGA TTTTATTGGT CCGGAAGCAT ATCGCGTGCA TGTATACACG
TTTCATGGTT TCTGTAATCA GGTCATTCAG GAAAATCTGG ACTACTTTGG CGTACGGAAT
TTACAGCCAA TCTCTGAATT GGAAACGATT GAGTTATATC AAAAACTCAT CGATAACTTT
GATGCAACAA GTAAGCTGAA GCGCTTTAAA GGAGACATAT ATTATGACCA GATTGGCCTG
AAAGAACTTT TCAAAAATAT GAAAAGTGAA GGCTGGTCGG AAGAGTCCAT GTATATCCTG
ATTGATCGTT ATGTAGACGA ATTGAAAGAT GATCCCGAAC ATCAATATAA ACGCAAGTCA
GGAAACAACA ACAAAGGGGA TTTAAAGGCT AGCTATTATA CAGAGATTGA AAAGATGGCC
AAACTTAAAG CGGCCATTGC AGAGTTTGCA AACTTCAATG CTGCTATGGG TGCCATACGT
CGTTACGATT ACAACGATAT GATTCTTTGG GTGCTGAAAG CGTTTAAAGA AAATGAATTG
CTGCTGCGCA ACTATCAGGA ACGGTATCAA TACATCTTAG TTGATGAGTA CCAGGATACA
AGCGGCTCGC AGAACGAAGT AGTAGATCTG CTTGCTTCGT ACTGGGAACG CCCGAACTTA
TTTGTTGTTG GCGATGACGA TCAATCCATT TACCGTTTTC AGGGAGCAAA TATTAAAAAC
ATCATTGATT TTAATAGTAA ATATAACCCT GCACTTATTG TGCTTAAAGA GAATTACCGT
TCTACACAAG CCGTGCTGGA TGCTTCCATG GCTGTTATAA AAAATAACAA CGAACGGTTG
GTAAACAGTG TACAAGGACT CGATAAACAA CTTACGGCTA AAGGCATAAT TGCAGCGTCG
CATGTTGAAC CGAAAATTAT TGAATATTAT AATGAACTGC ATGAAGAAGC GTCTGTTGTT
GAACAGCTGG AAAAACTTCA TCACGAAGGC GTTGACTTAT CTGAGGTTGC AGTGATCTAC
CGCAAACACT CAAAAGTAGC CGATATTATA AAGGTGCTGG AGAAACGCAA AATTCCGTTA
AACATTAAAC AAAGTATTAA TGTACTGCAC TTGCCATTCG TTCAGAATCT GATTGATATT
TTAGCTTACA TTCAAAAAGA AAATGAATAC CCGGATTCAG GAGAAGAACA GTTGTTCCGG
TTAATGCATT TTGAATATTT TAATATTGAC CCGACAGATA TTGCAAACAT TTCCAGAAAA
ACACGACGTA CGTCTGAAAG TTCCGCTATC CGCTGGCGCG AACTGATGTC TAAAAAAGAA
GAGCTGGCAA AACTGAATCT GCATTCGTTG CCATCCATTC TTTCACTGGA AGCAAACTTA
ACCTATTGGC AAAAAGAATT TCATAACATT ACCTTACAGG TGTTGTTTGA AAAAATTACA
ACACGCGGCG GCATACTTTC CTGGATCATG AATTCGTCTG AAAAGACCTG GTACATGCAG
GTATTAACAA CGTTCTTTGA TTTCTTAAAA GAAGAAACCG CACGCAATCC ATTGCTGTCG
CTGAAAGAAT TTTTGTCAAC CATACAGAAG ATGCTTGATA ATGATGTGCG GCTTAATCTT
CAAAAAATTA TTCATGCAGA AAAAGGTGTA AATTTTGTTA CCGCGCACTC TTCAAAAGGA
TTGGAATACC GGTATGTGTT TCTGATCGGC TGTAACTCCA GGCAATGGGA GGGACAGGCC
GAGCGGAGTT TTGGATTTAA AATTCCAAGT ACTATAACAG AAAACGTTGA ACACGATAAA
GAAGAAGATG AACGCCGGTT GTTTTATGTT GCATTAACAC GTGCGAAAGA ATATTTATAC
ATATCCTATC CGGCAAAAGA TGTTAATGAA AAGGAATTGG TCTGCAGCCG TTTTCTGGTA
GAACTTACCG AACAGGAAAC AACAAAAACA ACTTTTGTAA GCCTTTCAGA TGATGCTATT
GTTCAGTATA AACTAGACAT TCTGCAGTTT ACCGAACCTC CGGTAATTCC ATTGATAGAT
GCCGTTTATT TAACAGAATT ATTAGAGAGC TATCAGTTGA GTGTAACACA TCTGAACAAA
TATCTTTCAT GCCCGATTGC TTTTTATTTT GAAAACATGT TGATGGTGCC AAGTGCACGT
ACAGCTTCAT CGGGCTTTGG TACTGCGATA CACGAGGCAC TAAAAGATTT CTTTGCAGCT
ATGCTGGCAG ATGAAGAGAA GCGTTTTCCT ACGGTACAGT ATTTGTCTGA GGTATTTAAA
TTGAAATTGA AAAACGTGCA TTCGCACTTT ACATTGATTG AATATAAAAA TTATGAAACA
TATGGCTCTA CAGTAGTTTT GCCTGAACTG TATGAAACAT ATATTGGGGA GTGGGAAAAA
AATGTGTTGC TCGAACACCG CATCGATAAT GTTGAATACA AAGGCGTTCC TATAAAAGGG
AACGTAGATA AAATTGAAAT TCATGGTTCT GATGTAAATG TGATTGATTA TAAAACCGGT
AAATATGCAA GCAGTAAATC CAAGCTGCTG CCGCCGACAG AGAAAGAGCC GAATGGCGGT
GATTACTGGC GCCAGATTAT TTTCTATAAA CTTCTTATAG AAAATGACCG GAAAACAAAC
TACAAAGTTG TAACCGGCGA ACTTGATTTT GTTGAGCCGG ATGCTGCAAC AAAAAAGCCA
ACCAAACATA AGATTTTCAT TTCGCCGGAA GACGAACAGA TTGTTGCCAA TCAAGTGATT
ACTGCGTATG CAAAAATAAA GAACCATGAG TTTTCACAAG GCTGCGGCGA AGAGGATTGT
ACCTGGTGCA CGTTTGTGCG CTACAATTAC AAGCCAATGG AACTCACACA CAGTGAGCAG
GAGTAA
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| Protein sequence | MSSKASKYDL LFQEQLARLN TAQREAVETI EGPVLVIAGP GTGKTQILSA RIGKILASPD
LQVQPHNILC LTFTEAGTVA MRKRLLDFIG PEAYRVHVYT FHGFCNQVIQ ENLDYFGVRN
LQPISELETI ELYQKLIDNF DATSKLKRFK GDIYYDQIGL KELFKNMKSE GWSEESMYIL
IDRYVDELKD DPEHQYKRKS GNNNKGDLKA SYYTEIEKMA KLKAAIAEFA NFNAAMGAIR
RYDYNDMILW VLKAFKENEL LLRNYQERYQ YILVDEYQDT SGSQNEVVDL LASYWERPNL
FVVGDDDQSI YRFQGANIKN IIDFNSKYNP ALIVLKENYR STQAVLDASM AVIKNNNERL
VNSVQGLDKQ LTAKGIIAAS HVEPKIIEYY NELHEEASVV EQLEKLHHEG VDLSEVAVIY
RKHSKVADII KVLEKRKIPL NIKQSINVLH LPFVQNLIDI LAYIQKENEY PDSGEEQLFR
LMHFEYFNID PTDIANISRK TRRTSESSAI RWRELMSKKE ELAKLNLHSL PSILSLEANL
TYWQKEFHNI TLQVLFEKIT TRGGILSWIM NSSEKTWYMQ VLTTFFDFLK EETARNPLLS
LKEFLSTIQK MLDNDVRLNL QKIIHAEKGV NFVTAHSSKG LEYRYVFLIG CNSRQWEGQA
ERSFGFKIPS TITENVEHDK EEDERRLFYV ALTRAKEYLY ISYPAKDVNE KELVCSRFLV
ELTEQETTKT TFVSLSDDAI VQYKLDILQF TEPPVIPLID AVYLTELLES YQLSVTHLNK
YLSCPIAFYF ENMLMVPSAR TASSGFGTAI HEALKDFFAA MLADEEKRFP TVQYLSEVFK
LKLKNVHSHF TLIEYKNYET YGSTVVLPEL YETYIGEWEK NVLLEHRIDN VEYKGVPIKG
NVDKIEIHGS DVNVIDYKTG KYASSKSKLL PPTEKEPNGG DYWRQIIFYK LLIENDRKTN
YKVVTGELDF VEPDAATKKP TKHKIFISPE DEQIVANQVI TAYAKIKNHE FSQGCGEEDC
TWCTFVRYNY KPMELTHSEQ E
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