| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3172 |
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| Symbol | rplA |
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| ID | 4186098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3612119 |
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| End bp | 3612817 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073160 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_679754 |
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| Protein GI | 110639545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TGACAAAAAA ACAAAAAGAC GCTCTAAGTA AATTTGATGT CAATAATTCC
TACTCTCTTT CAGACGCATC AGCGCTAATT AAGGAAATCA CCTATACAAA ATTCGACGCT
TCTGTTGATA TTGATGTAAG ACTGGGTGTT GATCCTAAAA AAGCAGATCA AATGGTGCGT
GGTATTGTGA CGCTTCCTCA CGGTACAGGT AAAGATGTTC GTGTATTGGT TCTTTGTACA
CCTGACAAAG CTCAGGATGC TAAAGACGCC GGTGCAGATC ACGTAGGGTT AGACGACTAT
ATCCAGAAAA TCGAAGGTGG TTGGTTGGAT ATTGACGTAA TCATCACAAT GCCTACAGTT
ATGGCAAAAG TTGGTAAACT AGGTAAAATA CTTGGTCCGC GTAACTTAAT GCCTAACCCA
AAAGCCGGTA CTGTTACACT GGACGTGGCA AAAGCGGTGA AAGATGTGAA AGCTGGTAAA
ATCGACTTCA AAGTTGATAA ATTTGGTATC GTGCATACAA GCGTTGGTAA AGTATCCTTC
TCTCCGGAGA TGATTCTTGA AAATGCGAAT GAAGTATTGC AAGTGCTTGC TAAATTAAAG
CCTGCTTCAG CAAAAGGTAC ATATGTTAGA AGTATTACAC TTTCTAGCAC AATGAGCCCA
GGTATAACAA TTGATAAGAG CTCAGTAGCA GGTCTGTAA
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| Protein sequence | MAKLTKKQKD ALSKFDVNNS YSLSDASALI KEITYTKFDA SVDIDVRLGV DPKKADQMVR
GIVTLPHGTG KDVRVLVLCT PDKAQDAKDA GADHVGLDDY IQKIEGGWLD IDVIITMPTV
MAKVGKLGKI LGPRNLMPNP KAGTVTLDVA KAVKDVKAGK IDFKVDKFGI VHTSVGKVSF
SPEMILENAN EVLQVLAKLK PASAKGTYVR SITLSSTMSP GITIDKSSVA GL
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