| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3139 |
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| Symbol | rpsM |
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| ID | 4183617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3586689 |
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| End bp | 3587066 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073127 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_679721 |
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| Protein GI | 110639512 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.111016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.558725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGGA TTTCTGGTGT TGATATTCCC GATAACAAAA GAGGTGAAGT TTCTTTGACT
TACATCTACG GTATTGGTCG TAATTCAGCT CAAAGTATTT TGACGAAAGC TGGTGTAAAC
TGGGACAAGA AAGTTAGTGA ATGGAATGAT GATGAGGCGA ACGCAGTTCG TGCGATCATT
GCTTCTGAAC ACAAAACTGA AGGTGCTCTT AAGTCTGAAG TACAATTAAG CATTAAACGT
TTGATGGATA TCGGCTGTTA CAGAGGTCTT CGTCACAGAA AAGGATTACC TGTACGTGGT
CAGCGTACAA AAAACAACTG TCGTACTCGT AAGGGTAAAC GTAAAACAGT TGCAAATAAA
AAGAAGGCAA CTAAGTAG
|
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| Protein sequence | MARISGVDIP DNKRGEVSLT YIYGIGRNSA QSILTKAGVN WDKKVSEWND DEANAVRAII
ASEHKTEGAL KSEVQLSIKR LMDIGCYRGL RHRKGLPVRG QRTKNNCRTR KGKRKTVANK
KKATK
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