| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3110 |
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| Symbol | hrpB |
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| ID | 4186560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3552589 |
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| End bp | 3555069 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638073098 |
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| Product | ATP-dependent helicase |
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| Protein accession | YP_679692 |
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| Protein GI | 110639483 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.924657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT ACCCCATTGC AGAAATAGTT GAAGAGATTA AAGAAACACT GAATCTTCAG
ACAACTGTTA TTCTGCAGGC ACCGCCCGGT GCAGGGAAAA GTACCATTCT TCCGCTTGAA
TTATTGAAGG CAGACTGGCT TGAAGAAAAA AAGATTATTT TACTTGAGCC ACGGCGCATG
GCCGCGCGCA GTGTTGCACA GCGTATGGCC GATCTGCTGG GTGAGGAAGT AGGAAAAACC
GTTGGTTACC GGGTACGTTT TGATCAGCGT GTTTCAGCAC AGACACGAAT TGAAGTTGTA
ACAGAAGGAA TTCTGACACG ACGATTGCAG CAGGATAATA CACTGGAAGG TGTAGGCATG
GTTATTTTTG ATGAGTTTCA CGAACGTAGT TTACATAGTG ATCTGTCGCT TGCATTGTGC
AGAGACCTGC AACAGATCCT GCGGGAAGAT TTGCGCATCC TGATCATGTC TGCAACGCTG
GACGGAGAAA ATCTTTCAGC CATTTTAGAT AAAGCACCCA TCATAACAAG TAAGGGCCGC
CAATATCCGA TTGATGTGCG GTACACGTCG ATTGATACAA ACGCACCGAT AAGCGGACAA
ATAACAACGG TTATAAGTAA AGTACTAAAA GAAGAAACAG GGGACATACT TGTATTTTTA
CCCGGTGTAC GGGAGATTCA GCAAACAGCC GCTGCATTAA CAGAACGACA CGGCGATATT
GCTGTTCGTC CGCTGTACGG AGAACTGAGC CTGAATGCAC AGCAGGAAGC AATCCGCCCC
GATGCACAGC AGCGTCGAAA AGTTGTACTG GCTACGTCAA TTGCGGAAAC CAGTTTGACG
ATAGAAGGCA TACATATCGT TATTGACAGC GGTCTTGCAC GTGTACCAAA GTTTGATCCA
AACAGCGGCA TGACAAAGCT GGAAACCGTA AAGGTAACAC AGGACGCTGC CGACCAGCGT
GCGGGCCGTG CAGGCAGGCT TGGTCCTGGT ATCGCGATCC GGTTGTGGCC GGAAGCAACC
CAGCAGTATC TCAAACCTCA ACGCGTACCA GAAATTGCAG AAGCAGATCT GGCTCCGCTG
GTATTGGAGT TAGCACAATG GGGTGTGAGG GATATACAAT CCATGACCTG GATTACTGCC
CCTCCATCAG GATCGGTAGA TCAGGCGAGG ACATTGCTGC AGGAGCTTGA TGCCATACAG
AACGGTGTGA TAACAGAAGA TGGGAAAGCG CTGGCGAATT TACCGACACA TCCCCGTACC
GCACATTTAT TACTGAAAGG AAAAGAACAT ACTATACTTC CGCTTGCCAT TGATCTGGTT
TGTATTCTCG AAGAACGCGA TGCACTGGGC AAACATGCAG GAGCAGATAT AAGTTTGCGA
GTTGACGCCC TGCAGGCATG GCGCGCAGGT AAACGTTTTC AGGGCGACAC ATTTATCCTG
GAACGCATTG AACGTGCAGT ACAATCCTGG CGAAAAATTT TTTCCATTAA ATCATCTGTT
TATGAATTTG ATACGGATTC CATCGGCTTA TTGATTGCTG CTGCATACCC GGAACGGATT
GCCCGTCTGG TAGATGCAGC TTCAGCAAGA TACAGAATGG CAAACAGCCG CAATGTACGG
CTGCATGAAA ATGATGTTCT GGTAAAAGAA GAATGGCTGG CGGTTGCGCA TGCCGATGCC
GGGGTAGGTG AAGGCCGTAT TTACTGGGCC GCTGCGTTAA ACCCGATGCT GCTCACAGAT
CGTATGGTAC AGGAGGCTCG TATCCGGTGG GATGAAACAA AAGGTGTCTT GTTGCAGCAG
GAAGAAACCC GCATCGGGAG TTTGACCGTT ACATCAAAAC CCTTAAAAGA AGTAGATGAA
ACGTTGCGTG CAGCAGCATT ATGCGAAGCG GTGCGAAAAG AAGGACTGAA AATTTTTAAC
TGGGATGAAG CCTGTGTACA ATGGCAGGCA CGAATTCTTT CTCTTAAGCA ATGGCGGCCA
ACCGAAGCAT GGCCGAATGT AGATGCGGAA GGGTTGCTTC AAACCCTTGA AGACTGGCTG
CCTTTTTATC TGAAACAGGT AAAGCGCAGA GAAGACTTTA AAAAAATACC ATTGCCCGAA
GTATTACATA CCATCCTTCC CTGGGAACAG GCAAAGATAC TTGCTAAGCT TGCGCCTACG
CATATTGATG TGCCCAGCGG TTCATCCATT GCATTGGAAT ACAAAACAGA TGGAAGCTTT
CCCGTTTTAT CTGTACGCCT GCAGGAACTC TTTGGCCTTA CAGATACGCC AACGGTGAAT
GAAGGAAGAA CAAAAGTAAT GATTCATTTA CTTTCACCCG GCTATAAACC GGTACAGGTA
ACACAGGATT TAAAAAGTTT CTGGGCGAAT ACATACCCTG AAGTACGTAA AGAATTACGC
ATGCGGTATC CGAAACATTC CTGGCCGGAA GATCCATGGA ACGCAGAAGC GGTGCGTGGT
GTTAAAAGAA AAAATAGCTG A
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| Protein sequence | MNQYPIAEIV EEIKETLNLQ TTVILQAPPG AGKSTILPLE LLKADWLEEK KIILLEPRRM
AARSVAQRMA DLLGEEVGKT VGYRVRFDQR VSAQTRIEVV TEGILTRRLQ QDNTLEGVGM
VIFDEFHERS LHSDLSLALC RDLQQILRED LRILIMSATL DGENLSAILD KAPIITSKGR
QYPIDVRYTS IDTNAPISGQ ITTVISKVLK EETGDILVFL PGVREIQQTA AALTERHGDI
AVRPLYGELS LNAQQEAIRP DAQQRRKVVL ATSIAETSLT IEGIHIVIDS GLARVPKFDP
NSGMTKLETV KVTQDAADQR AGRAGRLGPG IAIRLWPEAT QQYLKPQRVP EIAEADLAPL
VLELAQWGVR DIQSMTWITA PPSGSVDQAR TLLQELDAIQ NGVITEDGKA LANLPTHPRT
AHLLLKGKEH TILPLAIDLV CILEERDALG KHAGADISLR VDALQAWRAG KRFQGDTFIL
ERIERAVQSW RKIFSIKSSV YEFDTDSIGL LIAAAYPERI ARLVDAASAR YRMANSRNVR
LHENDVLVKE EWLAVAHADA GVGEGRIYWA AALNPMLLTD RMVQEARIRW DETKGVLLQQ
EETRIGSLTV TSKPLKEVDE TLRAAALCEA VRKEGLKIFN WDEACVQWQA RILSLKQWRP
TEAWPNVDAE GLLQTLEDWL PFYLKQVKRR EDFKKIPLPE VLHTILPWEQ AKILAKLAPT
HIDVPSGSSI ALEYKTDGSF PVLSVRLQEL FGLTDTPTVN EGRTKVMIHL LSPGYKPVQV
TQDLKSFWAN TYPEVRKELR MRYPKHSWPE DPWNAEAVRG VKRKNS
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