Gene CHU_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3094 
Symbol 
ID4186544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3533792 
End bp3534625 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content40% 
IMG OID638073082 
Producthypothetical protein 
Protein accessionYP_679676 
Protein GI110639467 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGTA TAGGATTTAG AAAAGATTTT GCTGCAAAAT TTTTAAATAC TACGGATCTT 
CAGCCCGACT TCATTGAGGT TGCGCCTGAA AACTGGATTG GTATAGGCGG ACTCTGGAAA
AAAAGATTAC AACAGGCATT AGAAAAATAT CCCTTATACA CACACGGACT CTCTCTGTCT
ATAGGTAGTC CGGATGCATT AGATTTCGAT TTATTAAAAG GCGTAAAGAA ATTTTTAGCA
GAAACAGGCG CAAAAGTATA TTCCGAACAC TTGAGTTATT CCAAATGTGA TAATGCGCAT
CTGTATGATT TATTGCCGAT CCCTTTCACG CACGATGCTG TAAAGCATAT TGCTAAACGG
ATACAAACGA TACAGGATTT TCTGGAACGC AGACTTGCGA TCGAGATTGT GAGTTATTAC
TCACCTGTTG CAGCAGAGAT GAGCGAATTA GAATTTGTAA ATGCCATTCT GCAGGAATCC
GATTGTGATT TGCTGCTGGA TGTTAATAAT ATATATGTAA ACGGATTTAA TCACAACTAC
GATCCGTACG CATTCATTAA TCAGCTGCCT CTGGAACGTG TGGCGTATAT TCATATCGCG
GGTCACGATC AGGTTTCTGA AACACTGATC ATTGATACGC ACGGAGAAGC CATTGTTGAT
CCGGTGTATT ACTTGTATCA ATACACCATG AATCAGCTGC AGCGCGATGT GCCAACCTTG
CTGGAACGGG ACTTTAATAT TCCGCAGCTC TCCGAACTTC AGGGAGAGAT TGACCGGTTG
AAAAAAATAA AGGCTGATTG TTTAACAAAA GAACTTTATG GCATACAACG ATAG
 
Protein sequence
MVGIGFRKDF AAKFLNTTDL QPDFIEVAPE NWIGIGGLWK KRLQQALEKY PLYTHGLSLS 
IGSPDALDFD LLKGVKKFLA ETGAKVYSEH LSYSKCDNAH LYDLLPIPFT HDAVKHIAKR
IQTIQDFLER RLAIEIVSYY SPVAAEMSEL EFVNAILQES DCDLLLDVNN IYVNGFNHNY
DPYAFINQLP LERVAYIHIA GHDQVSETLI IDTHGEAIVD PVYYLYQYTM NQLQRDVPTL
LERDFNIPQL SELQGEIDRL KKIKADCLTK ELYGIQR