Gene CHU_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3077 
Symbol 
ID4183945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3514770 
End bp3516791 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content40% 
IMG OID638073065 
Producthypothetical protein 
Protein accessionYP_679659 
Protein GI110639450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TAATTGTGGC AGCTTGTATG CTGTTGGTAA CATTTTTTGT CAGCGCAGAA 
TCTATTGACT TAGGTCCGGA TGATATAAAA AATACTCACG CAGATCCTTG TACGGCGCCT
GTAATAATTG TTCAGCCTCG TCCGGTTAAT GGAGGGAAAT GCCTTAATTT TCTTCCGCAA
TTGATTGTGG ATGCATTAAA TGCCAGTTCT TACCAATGGT ATAAAAATGA TACTCCTATT
GATGGTGCAA CGCAGTATGT GTATTCGTTT AATAGTTCTG ATGATTCAAC AGACGTATTC
AGAGTCGATG TTATAAATGC GTGTGCAACC ATAATTTCCC AGACAACACG TGCAACAGGA
TTACCCTATG TGCTGCCATA TATGATTATA AATGCATCAC AAACAGCAGT AGGCATTGGC
CAGTCAATTA CTTTTACAAC AGAACAGCTT ACATACGGAG GCAGCTCACC TGAATACCGG
TGGATGGTAA ATTATAGTTA TGTAGAAGGT GCAACCAATG ATACATTTGT TTTACAATCC
CCAGTAGACA ATGATCGTGT TTATTGTGCA GTGAAAACAA ATTACCCCTG CGCAGTTCCT
TCGGAATTTT TGGTCGGGCC TATTACTGTT ACTGTTTATA GCAGCATTGG TGCCGGTATA
ATAAGCTCAG ATCAAACAGT CTGCCATACA GGTTTGCCAG ACCCGATTAT TGAAATTTCT
CCTGTAACAG GAGAAACAGC TAATACTACG TATAACTGGC AAGTATCACC GGATGGTGTT
GACTCATGGA CGGATATACC TGGAGCTACA GAAACCGATT ATGCACCGCA AATACCAGTA
ATAGCAGATG CGTATTATAG AAGAGTCGTA AAGGATGATT CATATCCGGA ATTGAAAAAT
ATGGCTGTCA GCAATGTTGT TGCAATCACT GTTACGCCCC TGGTTACGCC ACACGTATCC
ATCGCTGGTT TTGGCAATTC AATTCCGTTG TGCACCCCTA TAAACCTTTC TGCTCATGCA
ACAAACGGAG GCTTTGAGCC ATCTTACCGC TGGATGAAAA ATGGTGTAAC AATTGATTGG
ATTCAGAATT ATCCGGTGTT GATTGAAGAT AATTATGCAG CCGGCGATAT CTTTACTTGT
GAGATGACCA GCAGTCTGGC ATGTGTAACT ATATCAAAAG TAGTTTCAAA TCCAATTGAG
GCAATCGTTC AGGCATACCC ATCTGTTTCA ATCAGTCTAC ATACACAAAC TACTTTAACC
GATGGGCAAG CCATAATTCT AAAAGCTGTT TCAGAAGAAA GTCCTTATTT TTTAGAATAT
ACATGGTATA AAAATGGTCA GATCATTGGT GATCAAACGG AAACGTTAAG TACTACATAT
AAATCGGGAG ATGTGTATAC AGTAAAAATG AACGTTACAT ATTTTTGTCC AAAAACATAT
ACTGTGGTTT CTGAACCGTT AATATTAGGT TCTGATTTCA GTACTGCAAT CACAGGGCCG
GTTTCAGTAT TTCCGAACCA GACAGGAGTA CACTATTCTG TACCTCAAAG AGTAGGTATG
ACTTATTATT GGACTGTACC GGATAATGCA GACATCGTTT CGGGTCAAGG GACACATTCC
ATTGTAGTTG ATTTCGGAGT AAACGCGAAC ACGTTTAGTG CCAATCAGCG TACAGCGATA
AATAATGCCA TAACTGTAAA AGAAACAAAC GCAAATGCTG TAAGTTCAAC GCTTGCGTTA
CAAGTATCAA TTATAACAGC TACACGAGAC AGTAAACTTG AAGCTGCGTT ATCGGTCTAT
CCGGTGCCGG TGCAGGATGA ATGCCATATA GAATTTAAAG AAAAATTATC TTCCCAGGCA
TCTGTTACCT ATACACTCTA CGACTCAACA GGATTTTTAA TTACAACCGG AGTAGGTACA
GATAAAATTA AAATTGATAT GTCCGCTGTT CCGTCGGGAA TATATCTTTT ATTGGTAGAA
AAGGATGGAA GCACTGCCTC GAAAAAGATT GTGAAACAGT AA
 
Protein sequence
MEKIIVAACM LLVTFFVSAE SIDLGPDDIK NTHADPCTAP VIIVQPRPVN GGKCLNFLPQ 
LIVDALNASS YQWYKNDTPI DGATQYVYSF NSSDDSTDVF RVDVINACAT IISQTTRATG
LPYVLPYMII NASQTAVGIG QSITFTTEQL TYGGSSPEYR WMVNYSYVEG ATNDTFVLQS
PVDNDRVYCA VKTNYPCAVP SEFLVGPITV TVYSSIGAGI ISSDQTVCHT GLPDPIIEIS
PVTGETANTT YNWQVSPDGV DSWTDIPGAT ETDYAPQIPV IADAYYRRVV KDDSYPELKN
MAVSNVVAIT VTPLVTPHVS IAGFGNSIPL CTPINLSAHA TNGGFEPSYR WMKNGVTIDW
IQNYPVLIED NYAAGDIFTC EMTSSLACVT ISKVVSNPIE AIVQAYPSVS ISLHTQTTLT
DGQAIILKAV SEESPYFLEY TWYKNGQIIG DQTETLSTTY KSGDVYTVKM NVTYFCPKTY
TVVSEPLILG SDFSTAITGP VSVFPNQTGV HYSVPQRVGM TYYWTVPDNA DIVSGQGTHS
IVVDFGVNAN TFSANQRTAI NNAITVKETN ANAVSSTLAL QVSIITATRD SKLEAALSVY
PVPVQDECHI EFKEKLSSQA SVTYTLYDST GFLITTGVGT DKIKIDMSAV PSGIYLLLVE
KDGSTASKKI VKQ