Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3026 |
Symbol | |
ID | 4184959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3467986 |
End bp | 3469191 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073015 |
Product | hypothetical protein |
Protein accession | YP_679609 |
Protein GI | 110639400 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGCA TTACACTTAT TTTTACGTAT ACTCCTGTTC ATAGTCTGGA TGTTTTCAGT CCGATTTCGG ATGCGTTCAA AGATTTTGAA CTTACAGACA TGTATTTTTC CCAGTTTAAA GAAAATGAAG ATGTTGAAGA CAATATTGTG TTGGTAAATA TTGGTAATCT GGATCGTGGC GGAGTAGCAG CACTCGTTAA TACGTTAAAT GGCTTTGAAC CTAAAGCAAT TGGAATAGAT GCATTTTTCA GACATCCTAA AGATCCGGAC CTGGACTCTG CACTGGCACA GGCTTTCTCA CGTACAAAAA ATCTGGTTTT AGTTTCTGAA CTGATCGAAA ATCATGCAAC CGGAACGATA GACAGCATTA AATACTCCAA TAACATGTTT ATGCAGTATG CCGAACCGGG TTTTGCAGAT ATGATTGCAG AAGGAAAACA TAGCCTGAAT ACAGCCCGTG ACTGTATTCC GAAAGAAATT AAAAATGGAG ATACGGTTTT ATCCTTTCCG TCTAAACTGG TAAGTATTTA TGCTCCTGAG AAATTAAAGA GGTATTTAGC AAGAAATCAT GATGTTGAAG CCATAAACTA CGAAGGCAAT ATTAATGTTC ATGATGAAGG AAGTACCTCA AATTCAAAAA CTGTTTTTAC CGCACTGGAT TGGTACGAAG TTTTGGATTC ACAATTTACA CCTGAAACAA TTAAAGGAAA AATTGTAATT ATGGGTTTTA TGGGTGCAGA AATTGGTCAG AACAACTGGC AGGATAAATT TTGCACCCCG TTGAATAGCC AATATGTAGG CCGGACAGCA CCCGATATGT ATGGAGTTGT TGTCCATGCG AATATTGTCT CCATGATTCT GAAAGAGAAA TATATTAATG ATATGCCTGA CTGGCTCAAC TGGTCTCTAT CCTTAATACT GATATTTATT ATGATCTGGG GATTCAATTG GTTGTATTTG AACACAGCAG AATGGTGGGA TGGTATTTCG ATGATTTTAT CGCTTATAGG CGTAATTTTG CTTTCAGCCT TTATGGTTCT CATATTCCAT TTCTATAGTT ACACATTTGA TATTGCACTT GCATCCGTGG CATTATTATT GTCTGGTAAC CTGATAGAAA TATATTGGGG AATACTTAAG CCCCTTTATA TGAGAACAAA AGAAAAAAAT GTATCTTTAC TTAATCAAAA TAAAACCGGA GAATAA
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Protein sequence | MGSITLIFTY TPVHSLDVFS PISDAFKDFE LTDMYFSQFK ENEDVEDNIV LVNIGNLDRG GVAALVNTLN GFEPKAIGID AFFRHPKDPD LDSALAQAFS RTKNLVLVSE LIENHATGTI DSIKYSNNMF MQYAEPGFAD MIAEGKHSLN TARDCIPKEI KNGDTVLSFP SKLVSIYAPE KLKRYLARNH DVEAINYEGN INVHDEGSTS NSKTVFTALD WYEVLDSQFT PETIKGKIVI MGFMGAEIGQ NNWQDKFCTP LNSQYVGRTA PDMYGVVVHA NIVSMILKEK YINDMPDWLN WSLSLILIFI MIWGFNWLYL NTAEWWDGIS MILSLIGVIL LSAFMVLIFH FYSYTFDIAL ASVALLLSGN LIEIYWGILK PLYMRTKEKN VSLLNQNKTG E
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