Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3017 |
Symbol | |
ID | 4184950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3459752 |
End bp | 3460549 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638073006 |
Product | TPR repeat-containing protein |
Protein accession | YP_679600 |
Protein GI | 110639391 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGATTTT CTGTTTGCGC GCTGATTGTT TTTCTGCAAG TGTCTTGCGG TAAGTTTAAT CATTTGCAAA AAACAGGTAC ACCTCAGGAA AAGTTAACTG CAGCCATTGA GTACTATAAC AACGGTGATA ACTATAAAGC AGGTGTATTG CTGGAAGACA TAACTCCTAT TTTAAAAGGA AAAGGAGAAG CAGAAACGGC GTTATATTAT TTGGCGAACA ATTATTATAA GCAAAAGCAA TACATGATGA GCGCTTATTA CTTCAAGGAT TTTTATTTGA CTTATCCAAG AAGTAAATAT GTAGAAGAAA CCATGTACAT GAATGTATAT TCGTTGTATC TGAACTCGCC TGAGTATAAT CTGGATCAGA CAAGTACGTA TGATTGTTTA AAAGCAATGA CTACTTTTCT GACACGTTAT CCGAAGACGA TTTATCTGGA TCAATGTAAT GCAATTGTTG ATGAACTGAA TGCAAAATTG ATGCACAAGG CGTTTGAACA TTCCATGATG TATCATAAAG TAGGAAATTA TAAATCAGCG GTTGTCGCTA TCGGCAACTT CGTTAATGAA TATCCCAATT CCATTTATGG GGAAAAAGCA TACTTCACAC GTTTTACGTC TCAATATCAT TTAGCTAAAA ATAGTGTGGA AGGGAAAATT CAGGAAGAAA GATATATACT TGCCATTGAG TTTTATCAGA TATTCATGGA TAAGTACCCT ACTACCATTC ACAAAAAAGC TGCCAGCGAG ATGTATGATG ATATCATAAA GCGTTTGGAG AAGATTAAAT TAAAATAA
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Protein sequence | MRFSVCALIV FLQVSCGKFN HLQKTGTPQE KLTAAIEYYN NGDNYKAGVL LEDITPILKG KGEAETALYY LANNYYKQKQ YMMSAYYFKD FYLTYPRSKY VEETMYMNVY SLYLNSPEYN LDQTSTYDCL KAMTTFLTRY PKTIYLDQCN AIVDELNAKL MHKAFEHSMM YHKVGNYKSA VVAIGNFVNE YPNSIYGEKA YFTRFTSQYH LAKNSVEGKI QEERYILAIE FYQIFMDKYP TTIHKKAASE MYDDIIKRLE KIKLK
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