Gene CHU_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3003 
Symbol 
ID4183736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3444935 
End bp3445657 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content35% 
IMG OID638072992 
Productb-glycosyltransferase 
Protein accessionYP_679586 
Protein GI110639377 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00616181 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0256653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGA TTAAAACGCT TTCTATTGTA ATTCCTGCAT ATAATGAAGA ACGCACGATT 
CATTTAATTC TTAATAAAGT TTTGGATGTA ACGCTTGTTA ATGATATTCA AAAGGAAATA
ATTTTAGTGA ATGACTGTTC AAAAGACAAT ACAAAATCAA CAATAGAAAA ATATATTAAT
GATCATCCCG GTCACAATAT CGTTTTATAT AATCATGAAG TAAACAAAGG AAAAGGGGCA
GCGTTACATA CCGGGATCGA AAAGGCTCAG GGGGAAGTTG TCATTATTCA GGATGCCGAT
CTGGAATACG ATCCAAGAGA ATACAACATT CTTTTACAGC CAATCCTTGA AGATTTTGCA
GACGTTGTTT ATGGCTCCCG TTTTATCGGT GGGCGCCCGC ATAGAATTTT ATTTTTCTGG
CATACCATTG GAAATAAAAT GTTAACGTTT GCCAGCAACA TGTTCACCAA TCTGAATCTT
ACAGATATGG AAACGTGTTA CAAAGTATTT AAAAGCGATA TCATTAAAAA AATTGCACTT
AAAGAAAAAC GTTTTGGTTT TGAACCTGAA GTAACGGCAC GTATTTCGCA AATCCCAAAC
ATCCGTATTT ACGAAGTAGG TATCTCCTAC TATGGCAGAA CATACGAAGA AGGTAAAAAG
ATCGGAATGA AAGATGCATT CAGAGCCTTA TTCTGTATTA TCAAATATAA CTTATTCAAA
TAG
 
Protein sequence
MSQIKTLSIV IPAYNEERTI HLILNKVLDV TLVNDIQKEI ILVNDCSKDN TKSTIEKYIN 
DHPGHNIVLY NHEVNKGKGA ALHTGIEKAQ GEVVIIQDAD LEYDPREYNI LLQPILEDFA
DVVYGSRFIG GRPHRILFFW HTIGNKMLTF ASNMFTNLNL TDMETCYKVF KSDIIKKIAL
KEKRFGFEPE VTARISQIPN IRIYEVGISY YGRTYEEGKK IGMKDAFRAL FCIIKYNLFK