Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2972 |
Symbol | |
ID | 4186356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3402319 |
End bp | 3404190 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638072959 |
Product | metalloprotease |
Protein accession | YP_679555 |
Protein GI | 110639346 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.603107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.306607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATACA TCATCCTTTT TTTAACCGCC TTTTTTATCA CGTGTATGTC CCTTTACGCA CAGGACATAC AGCATTGCGG CAACGAAGCA TACATGCAGC AGCTTTCTGT AAAAGACCCG GCATTATATA AAAACATCAT GCAGTTTCAG CAGCAGCTCC ATGCGCACAC ACAAGCCATG CGTACAGCCG CTCTTCCGGA TAACATCATA CGGATTCCTG TGGTGGTGCA TGTGATCCAC AACAATGCTG CCGGAATAAT TGGCGGTACA AACAATACCA ACATCAGCGA TGCCCAGGTG ATTTCCCAGA TTGTTGTGCT GAACAAAGAT TATCAGCACA AGAACGCTGA CTCTGTAAAT ACACGCGCAG CGTTTAAACC GGTTGCCGCA AACTGTAAGT TTGAGTTCTG CCTGGCAGAA GTTGACCCGA ATGGAAATAG CACAACAGGT ATTACAAGAA CCTATACATC GAAAGCAAAT TTTACCATTG CAGAAGAAAC ACAACTGAAA TCATTGGCAT ACTGGCCGAG CGATCAATAC TTAAATATCT GGGTGTGCGA TTTACGCGGC ACACCCTCTA CACAGCTGCT GCTGGGGTAC TCTTCCCAGC CGGGCGGTCT TCCGGGCGGC GACTCAAACG ACCCGCAGGC CAATACAGAT GGTGTAGTGA TCAACTATAA AGCATTTGGT ACCGTTGGCA CGCTTTTTAC AAAATATAAT TTAGGACGCA CTGCTTCTCA TGAGATCGGC CACTGGTTAG GCCTGCTGCA TACCTGGGGA AATTTTGACA GCGGTTACTG CAATCAAACG GATTATTGTA CCGACACCCC TGTATGCGCC AATGCATTTG CTGCCGCCTC TCCTGCCTGT TCCGATAACC CGCCTGTAAA ATGTACCCCT GATATCGCGC GCATGATCGA AAACTACATG GATTATTCGG ATGATGCCTG CATGAATTTA TTTACCCAGG ATCAGAAAAC ACGCATGCGT TCTTCCATCG AACTGAGTCC GCGGCGGAAT GCATTGCTCA ACTCGCTTGG CTGCTGCACC ATTACAAACC TTGTTACCAT GGGGTATCAG AAATCGTTTG AAGATGGCTC ACTGCTTTCC GATGACTGGA CTACAATCAA CCCGAATGCA GCAAGTATCT ATACAGCAGG TTTTGAACTA AACAATGCAG TGAGCGGCTA CGGCAAAGGC AGCTATTGCA CATCGGTTAT AAATGACAGC GTATACAGTG CTTCTGATAA CAACACACAT AAATATGCAT ACAGCTTTGT GTCTCCGTAT ATGAATTTAC AGGCGTCCAG CATCCCAAAG ATGCGGTTCG ACTGGGCATA CAGCCCCAAG GTTGCCAACG GCACTACGGA TAGTATTGTG GTGTATGTAT CTTCGGGCTG CGTAGGCGAT TGGAATGTAT TGTACACCTT ATATGGAAAC AGCTTTACAA GCACACCAAA TCCGCGGGGG ATATTTACAC CAACGGCCGA TGAATGGATG ACCAGCGAGA TTGACATGAA CGCGTATAAA AACAATGCTG CCATCCGGGT TAAGTTTGTT GCCTATTCAA AAGGCATCAA CACGTTTTAC CTGGACAACA TCAACATTGT AAATGCTTCG CCGCAACTGC TGGCAAATGT GTATCCGGTT CCTACAAGCG GACTGGTAAA TGTATCAACT ACATTTGAAG GTAAGAAGAC CGTACATTAT GCGGTATACA ACACACTTGG CCAGTTTGTT TTTGAAGCAA CAGAAGAAGA TGTATACAGC AACATAAAAG AACTAAATCT GTCTTTTTTA GCCGGCGGTG TTTATTTTAT TAAAGTATCC GACGGAAAAG ATACGGTGTT AAAACGCATC GTGAAACAAT AG
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Protein sequence | MKYIILFLTA FFITCMSLYA QDIQHCGNEA YMQQLSVKDP ALYKNIMQFQ QQLHAHTQAM RTAALPDNII RIPVVVHVIH NNAAGIIGGT NNTNISDAQV ISQIVVLNKD YQHKNADSVN TRAAFKPVAA NCKFEFCLAE VDPNGNSTTG ITRTYTSKAN FTIAEETQLK SLAYWPSDQY LNIWVCDLRG TPSTQLLLGY SSQPGGLPGG DSNDPQANTD GVVINYKAFG TVGTLFTKYN LGRTASHEIG HWLGLLHTWG NFDSGYCNQT DYCTDTPVCA NAFAAASPAC SDNPPVKCTP DIARMIENYM DYSDDACMNL FTQDQKTRMR SSIELSPRRN ALLNSLGCCT ITNLVTMGYQ KSFEDGSLLS DDWTTINPNA ASIYTAGFEL NNAVSGYGKG SYCTSVINDS VYSASDNNTH KYAYSFVSPY MNLQASSIPK MRFDWAYSPK VANGTTDSIV VYVSSGCVGD WNVLYTLYGN SFTSTPNPRG IFTPTADEWM TSEIDMNAYK NNAAIRVKFV AYSKGINTFY LDNINIVNAS PQLLANVYPV PTSGLVNVST TFEGKKTVHY AVYNTLGQFV FEATEEDVYS NIKELNLSFL AGGVYFIKVS DGKDTVLKRI VKQ
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