| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2962 |
|---|
| Symbol | |
|---|
| ID | 4186347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3393810 |
|---|
| End bp | 3394640 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638072949 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679546 |
|---|
| Protein GI | 110639337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000474154 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000551426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA AATATTTATT GACCGTGTTA GCTATTATTT TGTTGTTATT TATTAACGCA
AGAAATAATA TTGTTTTAAC TGATTTTACA AAAGTTAGAG AAAAAACATA CATATATAAT
TTTGAGGTTT CTATAGAAGA GTATTACAAA TTTTTAAAAG ATAATAACTA TCAAACTGAA
TTATTACCTG ATACAACTGT GTTTAAAGAT ACATCAGTAT TTGGAACACA AATTATACCG
TATGGATTTT CTAAGGAGTA CTTCTCTTTA AAATTTAATA AATACCCTGC CGTAGGAATT
TCTTCAAAAC AGGCGGAGCA GTACTGTAAA TGGTTGTTCG CTTCAGGTAA AATAAAAGGA
GAAATTAAAG AAATTAGATT GCCTAATATT AATGAACACT ATTCAGCATT GTATCATCAA
ACGATTAATG TTGAATTTGA GCAAAACGGT AACTCAATGT TTATTCAAGC AAATAATAAT
GACGATAACC AATGGACGGA CTTGAATCAT TTCGATTTAA GTAAAACGTT TTTTAACAAT
ATGTTTAATG AAAATCTATC AGGTATTCAA GATGGATATG TGCATCTATG CCCTATAAAT
GCCTATTATA AGAACAAAAT TGTGAACTTG CTGGGAAATG TTTCAGAATG GGTATATGTA
GACTCTTTAA TTGTACCTGT TGGTAATAAT TTTTCAGGTG AATTAGGTTA TTGTAATAGG
CTCTCCAATC CTTCTTATTG TACTTTCGAT AAATCGTTAA TTACGTCAAA TGATATTTGG
GATAAGCCAT CAGCAAAGAT TGGATTCAGA TATGTTGTGG TAATGAAATA A
|
|---|
| Protein sequence | MKKKYLLTVL AIILLLFINA RNNIVLTDFT KVREKTYIYN FEVSIEEYYK FLKDNNYQTE
LLPDTTVFKD TSVFGTQIIP YGFSKEYFSL KFNKYPAVGI SSKQAEQYCK WLFASGKIKG
EIKEIRLPNI NEHYSALYHQ TINVEFEQNG NSMFIQANNN DDNQWTDLNH FDLSKTFFNN
MFNENLSGIQ DGYVHLCPIN AYYKNKIVNL LGNVSEWVYV DSLIVPVGNN FSGELGYCNR
LSNPSYCTFD KSLITSNDIW DKPSAKIGFR YVVVMK
|
|---|
| |