| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2889 |
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| Symbol | rgpA |
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| ID | 4184480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3303881 |
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| End bp | 3305080 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638072879 |
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| Product | a-glycosyltransferase |
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| Protein accession | YP_679478 |
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| Protein GI | 110639269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000672894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.063845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TAGCTATAAT TGGAACTGCA GGAGTACCTG CTCGCTATGG AGGTTTTGAA
ACGTTAGCAC ATCAATTAGT AACAAATCTG AATGATGAAT TCAAACTTCA TGTGTATTGC
AGCAACTCGT ATTATAAAAA AGAAGAACGT GTTAAGTATT GGAATAAAGC GAGGCTTTTT
TATGTTCCAT TAAATGCAAA TGGCCTGCAA AGTATTTTTT ATGATATCGT AACGATTATT
CATGCACTTT TCTATGCAGA TGCTTTAATT GTTTTGGGTG TTTCGGGTGG TATCATGATT
CCATTTATAA AGTTTTTTAC AAACAAAAAA ATCATTGTAA ATATTGATGG CTTAGAATGG
AAGCGTGATA AATGGAATTA CTTTATTCGT AAGTATTTAA AATTGTCGGA GTATCTGGCG
GTTAAATTTT CCGATGCAGA TATAACAGAT AATGCTGCTA TAAAAAAATA CACAGCCCTT
AATTATAAAA CGCTTAGTTA TTTAATTGAA TATGGAGCAG ATCATACTCA AGCTGTAGAA
ATTGAAGGAG AAGATTTTAT TAAATATCCA TTTTTGGGTA ATTCGTATGC ATTTAAAGTT
TGTCGCATAG AACCTGAGAA TAATGTTCAT GTAGTATTAT CAGCTTTTTC TCAAATGCCG
AAGCATAAAT TGGTAATGGT TGGAAATTGG AATGTAAGCG AATATGGAAA GCAATTAAAA
GAGAAATATC AAAATTCTGC AAATATCCTT CTTCTTGATC CTATTTATCA TCAGCGGACA
ATAGACTTAT TGAGATCAAA CTGTTCAATA TATGTTCATG GACATAGTGC TGGAGGCACG
AATCCAAGCC TTGTGGAGGC CATGTTTCTT GGTAATGCGG TAATTGCATT TAACGTTTCT
TATAACATTG CCACAACAGA AAATAAGGCT ATTTATTTTA AAGACGAAGC TGAGTTAATT
TCTGTTGTAA CGAAACTTAC ACAAGATCAA ATTAAAGCAA ATGCAATACG TATGAAAGAA
ATTGCCGATC GGCGATATAC ATGGAAAGAA ATTGCATCTA AATACGCCAA TCTCGTTTAT
GGATTTGATT ATAGATATGT TAAAAAATCT ATTCACTCAA GTGTTAAAGT AGTTAATGAA
AAGTACCTAC TTAAAAGTGG AGCAGCACAT TTAAATAATA CTAAAATGTT TTTTGAATAA
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| Protein sequence | MKKVAIIGTA GVPARYGGFE TLAHQLVTNL NDEFKLHVYC SNSYYKKEER VKYWNKARLF
YVPLNANGLQ SIFYDIVTII HALFYADALI VLGVSGGIMI PFIKFFTNKK IIVNIDGLEW
KRDKWNYFIR KYLKLSEYLA VKFSDADITD NAAIKKYTAL NYKTLSYLIE YGADHTQAVE
IEGEDFIKYP FLGNSYAFKV CRIEPENNVH VVLSAFSQMP KHKLVMVGNW NVSEYGKQLK
EKYQNSANIL LLDPIYHQRT IDLLRSNCSI YVHGHSAGGT NPSLVEAMFL GNAVIAFNVS
YNIATTENKA IYFKDEAELI SVVTKLTQDQ IKANAIRMKE IADRRYTWKE IASKYANLVY
GFDYRYVKKS IHSSVKVVNE KYLLKSGAAH LNNTKMFFE
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