Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2845 |
Symbol | kdsB |
ID | 4183411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3247684 |
End bp | 3248436 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638072836 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_679435 |
Protein GI | 110639226 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.892224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTA ACATCTCTAT TGTAGCAATC ATTCCGGCGC GCTACGCCTC TACCCGTTTT CCGGGAAAGC CTTTGATACA GATCAACGGC AAAACAATGA TCCAATGTGT GTACGATCAG GTGCGCAGCA CACCTGAAAT TACCGAAGTA CTTGTTGCTA CCGACGACGA CCGCATTGAA GCCGAAGTGC TGCGGTTTGG CGGTAAGGTT GTACGTACGC TACCCGAACA CCCAAGCGGC ACCGACCGTT GTTTTGAAGC CTATCAGAAA TTGAATAAGC CTTTTGATTT CATCATCAAT GTACAGGGTG ACGAACCTTT TATTCAGCCG GAACAGATCC GGACACTGGC AGGCATTTTA ACGCCGGATG TAGAGCTTGC AACGCTGATT AAAAAAATCG AAGACGAAGA AACATTATTC AATCCGAATA CGCCTAAGGT ATTGGTGAAT GCAAACGGTG AAGCAATCTA CTTCAGCCGG CAGACGATTC CGTATCTGCG TCAGCATGCG GATAAAAAAG ACTGGCTGGC CAACCATACG TTTTTCAAAC ACATCGGCAT GTATGCATAC CGTCCGGATA TATTGGCACA GATCACTCAG TTAAAACCGT CTGCACTGGA GCTTGCGGAA TCGCTTGAGC AGTTGAGATG GTTAGAGAGC GGCTATTCGA TCCACACGGC TGTTACTACG ATAGAGACTG TTGGTATTGA TACACCGGAG GATTTATTGA GAGTGACTCA TACATCCAGC TAA
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Protein sequence | MSSNISIVAI IPARYASTRF PGKPLIQING KTMIQCVYDQ VRSTPEITEV LVATDDDRIE AEVLRFGGKV VRTLPEHPSG TDRCFEAYQK LNKPFDFIIN VQGDEPFIQP EQIRTLAGIL TPDVELATLI KKIEDEETLF NPNTPKVLVN ANGEAIYFSR QTIPYLRQHA DKKDWLANHT FFKHIGMYAY RPDILAQITQ LKPSALELAE SLEQLRWLES GYSIHTAVTT IETVGIDTPE DLLRVTHTSS
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