| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2784 |
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| Symbol | arcB |
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| ID | 4186273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3173538 |
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| End bp | 3177206 |
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| Gene Length | 3669 bp |
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| Protein Length | 1222 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072773 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_679375 |
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| Protein GI | 110639166 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0520121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG AGCACGAATC CAGTTTTCAA GATCCTTCAA GAGATGAATT GATCCAGCAG
GTGAAGGAGT TGCAGATCAT TAATGCAAAC CAACGCCCTG AAAAAATTCT TCAGGAAGCT
TTTGAAAAAA TTAATTTATT AGTGATAACC ATCGACCAGG ATGGATTGAT TGTATATGCC
AACGAAGCTT TTCTGGAAGT GATCGGCTGG GAAAAACAAC GCCTTCTTGG CGAGAACTGG
AAAGAATTTT TAGAACCCGG AAAAGATAAA AACAAAGAAG AACATATTTA TACCCTGATC
AAAAAGCAGG GATTCATTGA TCAGCTGAAA CGGAAGTTCC TTTCTAAAGA GGGTGATTAC
CGCACCATAA AATTCAATGT AGTTATTCAT CACCCTATTG GTAACGATGT ACATTTAACA
ACACTGATCG GCGAAGATAT TACCGATAAA AAGAAAGTAA TCCGTGCGCT GAAAGACAGT
AATGACCAGT TACAGGATCT GTTTGAAAAT GCCAATGACT TAATTCAGGT GTTTGACCTG
GATGGGAAAA TTCAGTTTGT AAACCGTGCC TGGAAAGATA TTCTGCAATA TTCGGATGAA
GAAATACTGA AACTGAATTT CCGGGATATT ATTGCCAAAG AACAGGTAGG TGTTACCATG
GAACACCTGA ATAATATCTT AGCCGGAAAA AAAGACGACA AATTTGAAAC GGTCTTTACC
AGTAAAAACG GTCGCAACAT TCAGGTGATC TGCAGTGTGA ACGTACGGTA TGAGAAAGAA
AAACCGGTTT CGTTCAGAGG AATCTTTCAC GACAATACCG AACACATGCG TGCAGAACGT
GCGCAGAACC TGTATTACAA GATCTCTACC CTTGCCATCA ACAGCGACCG CCTGGATTCG
CTGCTGGACA ATATTCACAA AGAACTGCGA ACCATTATTG CTGTAAACAA CTTTCACGTT
GCGCTGTATG ACCGCGATCA TAATTATTTA AATTTCCCCT ATTACGTGGA TGAGAATATC
GGCCCAAAGC CGATCAGCAT GAAACGTATT GTAGGGAAAG GCTTAACAGA ATATTCGCTC
TTCAATGAAG AACCAACGTT CTTATATGAA GAAGACATCA ATAAACTTTC GGAAGCGGGA
GCTATTGAAT TACTGGGACC AACACCGAAG ATCTGGCTGG GTGTACCGCT GCGCTTAGAG
AACAGAACCA TTGGCGTGAT CTGTGTTAAA AGCCACAGTG ACCGGAATAA ATACAAACGC
CGGCACGTTG AGCTGCTGGA TTTCATTTCC GGACAGATTG CCCTGGTAAT TGAACGTAAG
CGCAATGAAG AACAGATCAT TGATAAAACG GCACGTTTAA ATGCCATCTT TGAAAGCAGC
TCGCACTTAA TCTGGTCGGT AAACCGCAAA CGTGGTTTAA CTTCGTTCAA TCAGAATTAC
GCGAATGCTA TTTTCAGAAA ATATCAAAAG TACCCGACCA TTTACGATGA AGGGGTAACC
AAAGAAGTAT TGGTGTTATC TGATCCGGAA TTTCATGATT CCATTGATAA AAAATACAAA
GACGCATTCA ACGGACAGCC GCAGCATTTT GAAGCCTGCA ATACCAACCA GAATGGGGAA
ATCTTCTGGC GCGAAACATA CCTGAACCCG ATCTTCCTTC CCGATGGCCG GATTGATGAG
GTATCGGGTA TTTCCCACGA CATTACGGAG AAGAAACAAT GGGAAATAAC GATTCAGGAA
AGCGAAGAAA AATTCCGGAA CATCTTCGAA TCGTTCCAGG ATATTTATTA CCGTACCGAC
CTGAGCGGTT ACATCACCAT GATCTCTCCT TCCGGCTGCG AACTGAGCGG CTATACACAG
GAAGAAATCA TCGGCAAACA CATCAGTGAA TTCTTTACCA CGCCGAAACA GCAGGTGAAC
CTGATCCGTG AAGTATTAAA AACAGGCCGG GTTAAAAATT ATGAAACGAA TGTAAACATC
AAAGGCGGGG AATCGATACA AAGTATTTCA AACATCCGTT TGATCTACAA CAACGAAGGA
AAGCCAATTG GTGTGGATGG TGTAGCCAGA GACATTACAT TTTTAAAGAA AGCATCGCAG
GAATTATATC ATGCCAAAGA GATTGCAGAG AAGTCGCTTA AGGTAAAGGA AAACTTCCTT
GCGAACATGA GTCATGAGAT CCGTACGCCA ATGAATGGTG TGATCGGTAT GATTGACTTA
TTGAATGAAA CACCGCTGAT GGAAGAACAG CGTAAGTATG TGCAGACGAT AAAAAAATCA
TCTGAAACAT TACTGAATAT TTTAAATGAC ATTCTGGATC TTTCTAAAAT AGAGGCAGGC
AAAATGCAGC TGCGTCTCGC TCCTATTTCC ATTGAGCAAA CTGTTGAAAA ACTGCATGCA
TTATTTTATC AGCAGGCAAC GTTAAAAAAT ATTGATCTGT TATACAGCAT TGATTCAAAT
GTGCCTAAAG TTGTGCTTGC AGATGAAACC CGTTTGCTGC AGATCCTTTC CAATCTTACA
TCCAACGCAA TAAAATTCAC CGATCAGGGT TCTGTCCGCA TCCAGATTTC TTTACAGTCT
AAAAAAGATC TGGTAAATAA AATCCGGGTC AACATCAGCG ATACCGGGAT CGGTATTGCG
CAAGACAAGC TGAATGTATT GTTCGGTTAT TTTAACCAGG TGGATAACTC TTCCTCTAAG
TCATACGGCG GTACCGGTCT GGGTTTAGCG ATTTCCAAAG AATTAAGTAA GCTGATGAAT
GGCGAGATTG GCGTGCAGAC AGAGGCCAAC AAAGGCAGTG TTTTCTGGTT CACCTTTGAA
GCCAATGAAA GCAAACGTTT GGTTGAAGCG AAAGTTGAAA CACCAAATGC ATTCTCCAGT
GAAAAAACAT TCAAGGATTA TCCGAAAATT TTATTGGTGG ATGATAACGC CATCAATCTG
TTTGTTGCTT CTGAAATCTT ACGGAAAGCG GGCTGTGAAA TTGACACCGC CGGCAATGGC
CTTGAAGCCA TCCAAAAGGT GAAGGAAAAC CCGTACCGGA TGGTGCTCAT GGATATACAA
ATGCCGCAGA TGGATGGTAT TGAAGCAACT GCTGAGATCC GTAAATTAAA TTTAGCCTAT
ACACCTCCGA TCATTGCCAT GACCGCTTAT TCCATGAAAG AGGATAAAGA CAGGTTTATG
GTCAATGGCA TGGACGATTA TATTGCGAAA CCCATCAAGG CAGAAAGTCT GATTTCAAAG
GTTAAAGCGT GGCTCGATTC AAATGCGGCT AAAAACGGAC ATACGGCAAC ACAAACAAGC
GATGAAACGG CGGTCGAGAT CCCGATTCTG GATCTGGAAG TGTTTGAAAA ACTAAAAAGC
CTTTCCGGTG CGGAAATAAT CGATCAGATT TATAAAGAGT TTGAAAATGA ATCACTTGAG
CAAATTGTGG ATTGTAAAAA TTCGCTTGCT ATGGGGGACT TTCATAATAT TTTAAATAAA
TTGCACACAT TAAAGGGCGT TTCCGGTACG CTGGGATTGA TTGAATTAGA ATCTATTTCA
AGATTGGTAG AATCTAAATT GAAAAAGGGA GATTATCCGG AATTAGCTGT TGATATTGAA
AAACTTTCTG AAGCGCATAA CCGTTTCATA GAGCATTACA CTTTTATTTT AAATTCGAAT
TCAAAATGA
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| Protein sequence | MSQEHESSFQ DPSRDELIQQ VKELQIINAN QRPEKILQEA FEKINLLVIT IDQDGLIVYA
NEAFLEVIGW EKQRLLGENW KEFLEPGKDK NKEEHIYTLI KKQGFIDQLK RKFLSKEGDY
RTIKFNVVIH HPIGNDVHLT TLIGEDITDK KKVIRALKDS NDQLQDLFEN ANDLIQVFDL
DGKIQFVNRA WKDILQYSDE EILKLNFRDI IAKEQVGVTM EHLNNILAGK KDDKFETVFT
SKNGRNIQVI CSVNVRYEKE KPVSFRGIFH DNTEHMRAER AQNLYYKIST LAINSDRLDS
LLDNIHKELR TIIAVNNFHV ALYDRDHNYL NFPYYVDENI GPKPISMKRI VGKGLTEYSL
FNEEPTFLYE EDINKLSEAG AIELLGPTPK IWLGVPLRLE NRTIGVICVK SHSDRNKYKR
RHVELLDFIS GQIALVIERK RNEEQIIDKT ARLNAIFESS SHLIWSVNRK RGLTSFNQNY
ANAIFRKYQK YPTIYDEGVT KEVLVLSDPE FHDSIDKKYK DAFNGQPQHF EACNTNQNGE
IFWRETYLNP IFLPDGRIDE VSGISHDITE KKQWEITIQE SEEKFRNIFE SFQDIYYRTD
LSGYITMISP SGCELSGYTQ EEIIGKHISE FFTTPKQQVN LIREVLKTGR VKNYETNVNI
KGGESIQSIS NIRLIYNNEG KPIGVDGVAR DITFLKKASQ ELYHAKEIAE KSLKVKENFL
ANMSHEIRTP MNGVIGMIDL LNETPLMEEQ RKYVQTIKKS SETLLNILND ILDLSKIEAG
KMQLRLAPIS IEQTVEKLHA LFYQQATLKN IDLLYSIDSN VPKVVLADET RLLQILSNLT
SNAIKFTDQG SVRIQISLQS KKDLVNKIRV NISDTGIGIA QDKLNVLFGY FNQVDNSSSK
SYGGTGLGLA ISKELSKLMN GEIGVQTEAN KGSVFWFTFE ANESKRLVEA KVETPNAFSS
EKTFKDYPKI LLVDDNAINL FVASEILRKA GCEIDTAGNG LEAIQKVKEN PYRMVLMDIQ
MPQMDGIEAT AEIRKLNLAY TPPIIAMTAY SMKEDKDRFM VNGMDDYIAK PIKAESLISK
VKAWLDSNAA KNGHTATQTS DETAVEIPIL DLEVFEKLKS LSGAEIIDQI YKEFENESLE
QIVDCKNSLA MGDFHNILNK LHTLKGVSGT LGLIELESIS RLVESKLKKG DYPELAVDIE
KLSEAHNRFI EHYTFILNSN SK
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