Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2776 |
Symbol | miaA |
ID | 4186265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3159099 |
End bp | 3160013 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638072764 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_679366 |
Protein GI | 110639158 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.144962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.440167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTTA TAAATAAATA CGTAATTGTT GTTGTTGGCC CAACGGCGGC AGGGAAAACA GCACTGGCTG TTTCGCTGGC AAAGCGGTTT AATACGGCCG TGCTCTCTGC AGATTCACGG CAGGTATTCA AAGAATTGAG CATTGGAACA GCTAAAGCAA CCATGGAAGA GCAGGATGGC GTGCCGCATT ATTTTGTGGA TTCAATTTCG ATTGAAGAAT CCTTTAATGC CGGAATGTTT GAGCGGGAGG GCCTGCAGCT GCTGGATACC TTATTTCTTA AACACGATGT AGTGATTGTA TGCGGCGGCA CAGGCTTGTA TGTAAAGGCA CTGCTGGAAG GTATGGATGC ACTGCCGCAG GCAGACCCTG AATTGCGGGA AGCATTGAAC AGAGAATTTG AACAGCGCGG CCTGGAGGTC ATGACAGGTG AATTGAAGGA AATAGATCCG GAAACTCATG CTGTTATTGA TCTGAAAAAT CCCTTGCGGG TATTCAGGGC TATTGAAGTA TACCGGCAGA CGGGTAAACC GCTTTCCTCT TTTAAAACGG GAGCCAAGCA GGAGCGGCCG TTTAAAACCA TCAGGATCGG GCTCAATATG CCAAGGGAAG AATTGTATGC ACGTATTGAC CGCCGTATGG ATCGGATGCT GGAGGCCGGG CTGGAAAAGG AAGCGCGGGA TAATATACAA TACAGAAATT ATAATGCGTT ACAGACGGTT GGTTATTCAG AGATCTTCGG ATTCATTGAT GGCCTGTATG ATCGGGAAGA AATGATCCGG CTGTTAAAGC GTAACAGCAG GAGGTATGCC AAACGCCAGC TGACGTGGTT TTCCAAAGAT GCCGAAGTGA AATGGTTCCA TCCCGGAGAA ATAACGGAGA TTACAACGTT TATTGAAGCT AAGTTGCAGG AGTAG
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Protein sequence | MSFINKYVIV VVGPTAAGKT ALAVSLAKRF NTAVLSADSR QVFKELSIGT AKATMEEQDG VPHYFVDSIS IEESFNAGMF EREGLQLLDT LFLKHDVVIV CGGTGLYVKA LLEGMDALPQ ADPELREALN REFEQRGLEV MTGELKEIDP ETHAVIDLKN PLRVFRAIEV YRQTGKPLSS FKTGAKQERP FKTIRIGLNM PREELYARID RRMDRMLEAG LEKEARDNIQ YRNYNALQTV GYSEIFGFID GLYDREEMIR LLKRNSRRYA KRQLTWFSKD AEVKWFHPGE ITEITTFIEA KLQE
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