| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2741 |
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| Symbol | murD |
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| ID | 4185331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3125921 |
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| End bp | 3127273 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072731 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_679333 |
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| Protein GI | 110639124 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.328147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAGA AAATAGTCAT ATTAGGTTCA GGAGAAAGTG GTGTAGGCGC TGCTTTGCTG
TCAAAAGCAA AGGGCTACGA TACGTTTGTC TCTGACTCAA GTATGATTAC CGAAGCATTC
ATTGCTGAAT TACAGCAAGC AGGCATTGCA TTTGAGCAAG GTGTACATTC AGAAGAAAAA
ATACTGTCGG CACAGCTGAT TGTTAAAAGC CCGGGTATAC CTGAAAAAGC CCCGATCATG
AAACTGATCC GTTCCAAAGC AATTGAAGTG ATTTCAGAGA TCGAATTTGC ATACAGACAT
ATTCATCCAG GTGCCAAATT TATTGCAATC ACAGGAAGTA ATGGTAAAAC AACTACAACC
TTATTAACGC ATCACATACT GGCACAACTT GGTTACTCTG TTGGCTTGGG GGGGAATATC
GGAACGAGTT TAGCGCGCCA GATTATTCAT GAAAAGAAAG ATGTATATGT ATTGGAATTG
AGCAGTTTTC AGCTCGATGA TATGTATACG TTTAAAGCAG ATGTAGCTGT GTTGTTGAAC
ATAACGCCGG ATCACCTGGA CCGGTATGAA TATAAATTCG AAAATTATAC CGCATCAAAG
TTCAGAATAT TTCAAAATCT GACACCCGCA GATTATTACA TAACATATTC AGAAGACAGC
GTAATTGAAT CGTATAAAAA AGATCATCCG GTTGATGCAC GTTATGTGCC TGTTTCATTG
AAACAGCTTT ATAGTGCAGG TGCGTATTCA GATGAAAAAA CCATTCAGAT CCATGCACTT
GATGATACTG TTGTTACCTG TAATACGGAA GAATTTCCGT TGCAGGGGAA ACATAATTAT
ATAAACATTA TGGCTGCATT GAATGCAGCA GTATCTATCG GTGCTGATAT TCATAAAAGC
ATTGCGTCAA TAAAAAGCTT TAGAAATGCA CCACACAGAC TTGAGTTTGT TGGTTCTATT
TATGGAGTGA AGTTTGTAAA TGATTCCAAA GCTACAAATG TAGATTCTGT CTGGTATGCA
TTGGATAGCA TGAAAACGCC GGTTGTGCTG ATTGTGGGCG GTGTAGATAA AGGTAATGAC
TACTCGCAGA TTGAAGCATT GGTAAAAGAA AAAGTTCATA CGGTTGTTGC CTTAGGTAAA
GATAATTCAA AAGTGCTGAG TGGGTTTGCT TCTATGGTTT CTGAAATCAA AGAAGCACAT
TCCATGGTTG AGGCAATTCG CATCGCGCAT GATTCAGCAA AAAAAGGAGA TACTGTTTTA
CTTTCTCCGG CATGTGCGAG TTTTGATTTG TTCAAGAATT ATGAAGACCG CGGAACACAA
TTTAGAAATT TAGTAATTGA ATTAGCAGGT TAA
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| Protein sequence | MSQKIVILGS GESGVGAALL SKAKGYDTFV SDSSMITEAF IAELQQAGIA FEQGVHSEEK
ILSAQLIVKS PGIPEKAPIM KLIRSKAIEV ISEIEFAYRH IHPGAKFIAI TGSNGKTTTT
LLTHHILAQL GYSVGLGGNI GTSLARQIIH EKKDVYVLEL SSFQLDDMYT FKADVAVLLN
ITPDHLDRYE YKFENYTASK FRIFQNLTPA DYYITYSEDS VIESYKKDHP VDARYVPVSL
KQLYSAGAYS DEKTIQIHAL DDTVVTCNTE EFPLQGKHNY INIMAALNAA VSIGADIHKS
IASIKSFRNA PHRLEFVGSI YGVKFVNDSK ATNVDSVWYA LDSMKTPVVL IVGGVDKGND
YSQIEALVKE KVHTVVALGK DNSKVLSGFA SMVSEIKEAH SMVEAIRIAH DSAKKGDTVL
LSPACASFDL FKNYEDRGTQ FRNLVIELAG
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