Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2716 |
Symbol | engB |
ID | 4185246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3103376 |
End bp | 3103975 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072706 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_679308 |
Protein GI | 110639099 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.042273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGA ATGCAAAATT CATCAGTAGT TATGATGATT ATCAAAAATG TCCTGAAATA ACGAAACCTG AATATGCATT TATTGGGCGC TCAAATGTGG GTAAATCATC GTTAATCAAT TCGTTGACAG GAGTTAAGAA TCTGGCTATG ACCTCTTCCA AACCTGGTAA AACACAATTG ATCAACCTGT TTACCATTGA GGAAACGTGG ATTCTGGCCG ATTTACCGGG GTATGGATTT GCCAAAGCGA GCCAATCCAG CAGAATCAAA TGGGGCCGCA TGGTACATGA TTATCTGAAA AACCGTACGA ACCTTACCAC CGTATTCTTA TTGGTAGATT CGCGGCATGA GCCAATGAAA TCTGATCTGG AGCAGATTAC CTGGCTGGCG AGCAATGGTA TCCCGTTCAG TTTAATCTTT ACTAAAATTG ATAAACAGTC TCTTACCCAA ACCAATAAGA TTCTGGCAAG CTGGACAAAA GTTTTAAGTG AAAATTGGGA AGAATTACCT AAAATGTTTT TAACTTCTTC TGAATCCGGG AAAGGTACAG AAGAACTGTT AACCTACATA GACGAAATCA ACAAACAGAT TGCAAATTAA
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Protein sequence | MKMNAKFISS YDDYQKCPEI TKPEYAFIGR SNVGKSSLIN SLTGVKNLAM TSSKPGKTQL INLFTIEETW ILADLPGYGF AKASQSSRIK WGRMVHDYLK NRTNLTTVFL LVDSRHEPMK SDLEQITWLA SNGIPFSLIF TKIDKQSLTQ TNKILASWTK VLSENWEELP KMFLTSSESG KGTEELLTYI DEINKQIAN
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