Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2698 |
Symbol | |
ID | 4184566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3084568 |
End bp | 3085392 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638072689 |
Product | orotidine 5' phosphate decarboxylase |
Protein accession | YP_679291 |
Protein GI | 110639082 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0183887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CAGATTTAGT AACAAGCATT AAGCATAAGA AGTCCTACCT GTGTGTGGGT CTGGATACAG ATACTACAAA AATACCTGCG CATCTATTAA AAGCTAAAGA TCCGATCTTT GAATTCAATA AATACATTAT TGATGCAACC ATTGATTATG CGGTTGCCTA TAAACCAAAC CTGGCATTTT ATGAATCGCT TGGCAAGGCA GGATGGGAGT CGTTAGAGAA AACACTGGAA TGGATGCCGA AAGATGTATT TACCATTGCA GATGCAAAAA GAGGTGATAT CGGTAATACT GCTACCATGT ATGCAAAAGC ATTCTTTGAA CAGTTACCGT TTGATTCTGT AACGGTAGCA CCGTATATGG GAGAAGATTC GGTTACTCCT TTTCTGGCGT TTAAAGATAA ATGGGCTATT GTATTGGCTC TGACGTCGAA TGCAGGCAGC AAAGATTTTC AGCAGCTTTC ATTAAGCGAT ACAAATCAAC CGCTTTATAA AGAAGTGCTT AAGAAATGCG CGGCTTGGGG AAGTGATGAA AACCTGATGT TTGTAGTAGG AGCAACAAAA GCTTCGTATT TCAAAGAAAT CCGTACGATT GTTCCGGATC ATTTTTTATT GGTTCCCGGT GTTGGTGCGC AGGGAGGGAA CTTACAGGAG GTTTCTCAGT TTGGATTGAA CAGTTCATGC GGCTTACTGG TAAACGCGTC AAGAAGTATT CTATATGCTG CAAACGATGA AACGTTTGCA GCAGCTGCAA AAGCAGAAGC AAAGCAGATG CAGCAGGAAA TGAAAACATA TTTAGAAGAT TACCTTAGCT GGTAA
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Protein sequence | MNKADLVTSI KHKKSYLCVG LDTDTTKIPA HLLKAKDPIF EFNKYIIDAT IDYAVAYKPN LAFYESLGKA GWESLEKTLE WMPKDVFTIA DAKRGDIGNT ATMYAKAFFE QLPFDSVTVA PYMGEDSVTP FLAFKDKWAI VLALTSNAGS KDFQQLSLSD TNQPLYKEVL KKCAAWGSDE NLMFVVGATK ASYFKEIRTI VPDHFLLVPG VGAQGGNLQE VSQFGLNSSC GLLVNASRSI LYAANDETFA AAAKAEAKQM QQEMKTYLED YLSW
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