Gene CHU_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2582 
SymbolcreD 
ID4185701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2958769 
End bp2960151 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content39% 
IMG OID638072574 
Producthypothetical protein 
Protein accessionYP_679177 
Protein GI110638968 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTA ATTTCAATAC ATGGGCACGT ACCTCCATTA CATTAAAACT GGTCATAATA 
GGCATCTTGG TTTTGGTATT GCTTATACCA ACCAACATGG TGCAGAACTT AATACAAGAG
CGTGAAACAA CCCGCGACAG CGCCGTTTCA GAGGTAGCTT CAAAATGGGG AATGGACCAA
ACAATTGGTA CACCGATTAT TTCTATTCCC TATTACACCG TTGTGGTAAA CGCAAATAAT
CAAAAAGAAA CGTATCGGAA TTATGCGCAC ATTTTGCCGG ATGACATTAA AATAAAAACA
AAGCTTGTGC CTTCTACAAA GAAACGTGGT CTTTATGAAG TTGTGTTGTA TAATACACAG
GTGTCCATAC TCGGATCATT TAAATCTGAA ATTCAAAACC TGCAGCAAAA AACAAGCAAT
ACGCTGCGTC TTGATCAGGC CTGTATTCAG CTGGGCATAT CGGATTTGAA AGGATTAAAA
GATGTAGTGC AATTCAACAT GGATGGAACA GACACATTTG AATTCAACCC TGGTGTTCCA
AATACAGATA TCTATAATTC AGGTATGAGT TTTCCGATTG ACTTAACGGC GAAAGATGCC
TTTGCCTTTT CATGCAATCT GAATTTAAAT GGCAGCACAT CCCTTCACTT TCAGCCTTAT
GGAAAAAAAA CAATGGTGGA ATTAACTACT ACATGGGCCA ACCCGAGCTA TCAGGGAGCC
TTCCTGCCTG ACACCAGTAT CACTACTGAA ACAGGTTCTT ATGCGCGCTG GAAAATACTG
CAGCTAAACA GAAATTATCC CCAATATGGT TTTGGTGATT TTATCAGACA AAGTGAACGC
GCAGCTGCAA ACATAACCGA TGGGCAAGCT TCGTCCTTTG GTTTGCGTCT GATTTTACCC
GTAGATCAGT ATCAGAAAAT CACGCGGTCT GCAAAATATT CCATCATGTT TATATTATTA
ACTGTTGTTG CTTTCTTTTT TGTAGAAATC ATTAACAAGA AAAAAATTCA CCCGATACAG
TATTTGTTGA TCGGTTTTGG TATCGTATTG TTTTACGTGT TATTACTTTC TATTTCTGAG
CATACCAATT TTGAAACCGC TTACTGGATT TCATGCGCCG GCATTGTACT GCTGATCAGT
TTATATACAC AATCCATGCT TCGCAAAATT AAAGTTACCC TGCTTATCGC TGCTATCCTG
AGCACGCTTT ATGTATTCTT TTATGCTTTG CTGCAATTAC AGGATTTCTC TTTACTAATG
GGAAGTATCG GCTTATTCAT TATACTGGCT GTTACCATGT ACCTGACCCG AAATATTGAC
TGGTACAAAG AAGACAATTC TTCAACAGAA AATTTTTCTG CAGCGCCTGA ATCACTTGAC
TAA
 
Protein sequence
MSSNFNTWAR TSITLKLVII GILVLVLLIP TNMVQNLIQE RETTRDSAVS EVASKWGMDQ 
TIGTPIISIP YYTVVVNANN QKETYRNYAH ILPDDIKIKT KLVPSTKKRG LYEVVLYNTQ
VSILGSFKSE IQNLQQKTSN TLRLDQACIQ LGISDLKGLK DVVQFNMDGT DTFEFNPGVP
NTDIYNSGMS FPIDLTAKDA FAFSCNLNLN GSTSLHFQPY GKKTMVELTT TWANPSYQGA
FLPDTSITTE TGSYARWKIL QLNRNYPQYG FGDFIRQSER AAANITDGQA SSFGLRLILP
VDQYQKITRS AKYSIMFILL TVVAFFFVEI INKKKIHPIQ YLLIGFGIVL FYVLLLSISE
HTNFETAYWI SCAGIVLLIS LYTQSMLRKI KVTLLIAAIL STLYVFFYAL LQLQDFSLLM
GSIGLFIILA VTMYLTRNID WYKEDNSSTE NFSAAPESLD