Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2535 |
Symbol | cca |
ID | 4186815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2918634 |
End bp | 2920073 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638072528 |
Product | tRNA adenylyltransferase (tRNA nucleotidyl transferase) |
Protein accession | YP_679131 |
Protein GI | 110638922 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTTGCA GAATGAATCT GAAAACGTCG ATTGAGAATA ATGTTCATAT CCGTGCGGTA GCAGCTGCCG CCGATGAACT TGGACTCGAG ACATATATTG TAGGTGGCTA TGTGCGCGAT CTGATCATGG ACCGCGATAA TAAAGATATT GATTTTGTTT GTCTGGGCAG CGGTATAGAG CTGGCGCAGA AAGTAGCTGC AAATATGGGC GAACATGTGC AGGTGCATAT TTTTAAAACC TTCGGAACGG CAATGATCAA TGCCGGCGAT ACGGAACTTG AATTTGTGGG AGCACGTAAA GAGTCGTACG ATTTCAATTC GCGCAAACCC ACAGTAGAGA GCGGTACACT GGAAGATGAC CAGCTGCGCC GTGATTTTAC CATCAATGCA TTGGCGATCT GCCTGAATAA AGCCCGTTTC GGCGAGCTGG TAGATCCATT TGATGGTGTG AGTGATATTA AACGTAAAAT TATTAAAACA CCGCAGGATG CCTTGCTGAC ATTCTCAGAC GATCCGCTGC GAATGATCCG TGCGGTCCGT TTTGCTACCC AGCTGAACTT TGATATTGAA GCGGCAACCT TTCAGGCCAT CGCCACCAAT AAAGATCGGT TAAGTATTGT TTCCATGGAA CGTATTTCGC AGGAATTGAA TAAAATCATT TCGGCCCCTG TGCCTTCTTA CGGGTTTAAG CTGCTGTATA TTTCAGGTGT GTTAAAAGAC ATCTTTCCGG AATTTGTGGC GCTGCATGGT GTGGAATCCA TCGATAATAA ATCACACAAG GATAATTTCT ATCATACACT GCAGGTACTG GATAATGTGG CAAAAGTATC GGATGATCTG TGGCTGCGCT GGGCAGCTAT TCTGCACGAT ATTGCAAAGC CTCTTACCAA ACGTTTTGTA GAGCGTATCG GCTGGACATT CCACGGACAT GAAGATAAGG GCGCGCGAAT GGTGCCCGCT ATTTTCAGAA AGCTCCGTCT GCCGTTAAAT GAAAAGATGG ATATGGTTGC GAAGCTGGTC CGCCTGCATC TACGCCCGAT TTCTCTGGTG AAAGATGAAG TGACCGATTC TGCCGTACGC AGGCTGATGT TTGAAGCAGG TGAACATTTT TCAGATCTTA TGATCTTATG CCGTGCCGAT GTTACATCAA AGAACAATAA TAAAGTAAAG CGCTACCTTG AAAATTTTGA TAAGGTAGAA CGCAAGGTTA TTGAAGTAGA AGAAAAAGAT CAGCAGCGTA ATTTCCAACC CGTAGTGAGC GGCGAAGATA TTATGAAAAC ATTTGATATC AAGCCCGGAA AAGTAATCGG CGACATTAAG GCTGATCTGA TTGAAGCCAT CCTGGAAGGC GATGTGCAGA ATGAATATGA GATTCTGTTT CCGTTTATGA TAAATCTGGC GGAAAAGAAA TACGGACTCG TGAAACCGGA AACGCATTAA
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Protein sequence | MFCRMNLKTS IENNVHIRAV AAAADELGLE TYIVGGYVRD LIMDRDNKDI DFVCLGSGIE LAQKVAANMG EHVQVHIFKT FGTAMINAGD TELEFVGARK ESYDFNSRKP TVESGTLEDD QLRRDFTINA LAICLNKARF GELVDPFDGV SDIKRKIIKT PQDALLTFSD DPLRMIRAVR FATQLNFDIE AATFQAIATN KDRLSIVSME RISQELNKII SAPVPSYGFK LLYISGVLKD IFPEFVALHG VESIDNKSHK DNFYHTLQVL DNVAKVSDDL WLRWAAILHD IAKPLTKRFV ERIGWTFHGH EDKGARMVPA IFRKLRLPLN EKMDMVAKLV RLHLRPISLV KDEVTDSAVR RLMFEAGEHF SDLMILCRAD VTSKNNNKVK RYLENFDKVE RKVIEVEEKD QQRNFQPVVS GEDIMKTFDI KPGKVIGDIK ADLIEAILEG DVQNEYEILF PFMINLAEKK YGLVKPETH
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