Gene CHU_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2529 
SymboltalAB 
ID4187054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2915118 
End bp2915774 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content40% 
IMG OID638072522 
Productputative translaldolase 
Protein accessionYP_679125 
Protein GI110638916 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TTATTGACAC TGCCAACCTG AATGAAATTA GAGAAGCACA AGAGCTTGGT 
ATTTTAGATG GTGTTACAAC AAACCCTTCG TTAATGGCCA AAGAAGGTAT CTCTGGCAAA
GATAATGTTT TCAAGCACTA CAAAGCGATC TGTGATATTG TAGATGGTGA TGTTAGTGCT
GAAGTAATTG CAACCGATTA TAAAGGTATT ATCGAAGAAG GCGAAGAGCT TATTACGATT
GATCCTAAGA TTGTTGTGAA AGTACCTATG ATTAAAGATG GTATTAAAGC GATAAAATAT
TTCTCTCAGA AAGGTATCCG TACAAACTGT ACATTGGTAT TCTCTGCTGG CCAGGCACTA
CTTGCTGCCA AGGCTGGTGC AACGTATGTA TCTCCATTTA TCGGCCGTCT GGACGACATC
TCTCAGGATG GCATGGAACT GATTGCACAG ATCGTCGGGA TATACAGAAA CTATGATTAC
CAGACTGAAG TATTGGCTGC TTCTGTACGT CACACCATGC ACTTAATTAA CTGTGCAGAA
GTAGGTGCAG ATGTTGTTAC GTGCCCGTTA AATGTAATCA CCGGTTTATT GAACCACCCC
CTTACAGATA GCGGCTTAGC TAAATTTTTA GCCGATCATA AAAAAGTAAA CGGTTAA
 
Protein sequence
MKFFIDTANL NEIREAQELG ILDGVTTNPS LMAKEGISGK DNVFKHYKAI CDIVDGDVSA 
EVIATDYKGI IEEGEELITI DPKIVVKVPM IKDGIKAIKY FSQKGIRTNC TLVFSAGQAL
LAAKAGATYV SPFIGRLDDI SQDGMELIAQ IVGIYRNYDY QTEVLAASVR HTMHLINCAE
VGADVVTCPL NVITGLLNHP LTDSGLAKFL ADHKKVNG