Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2517 |
Symbol | |
ID | 4187042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2893423 |
End bp | 2895270 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638072510 |
Product | hypothetical protein |
Protein accession | YP_679113 |
Protein GI | 110638904 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.174672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGGGAAA GTATGGATAA ATTGTTGTTG AGGTTACTAT TCTTCCTGGT AACGGCATTG TTTTTTCAGT TCAATGGCTA CGCTACACAC ATCGTTGGAG GGGATATTTT TATCCGATGG ACAGGAACAG ATAATCGTTA CCAGATCATA TTAAATAAAT ATGTAAATGA AAGAGGTTAT TATCAGGAAA TTTATGGTCC GGACGCTATT GAAACAGTTA CGCTTGAATT TTCAAATGGT AATAATACTA CAGTTATCCG CACAGAATAT CTAGCGTTGA TATCGAATAC ACTTCTGGTC AATAACAATA ATTATTGTGT CAATTCAACT ATTGTTAAAA CAAGTTTACA GGTGTATCAG AGTGTTGTAA CCCTGAATGA ATTTAATTCC TATGATGCAT GTAAAGTAAG GTGGGTGCAG TGCTGCAGAA GTTCGGATAT TACAAATATT GCCAAATTGT ATAGTAGCAG TAGCAATAGT TATAGTCAAG AACAGGAGAT ATTTTTATTT ACAACAAAAT ACGAAGGGAA AATAAAAAAC ACAACGCCAT TTTTCAAACG CTTAAATAAC GAATATTTTT GTCTGGATGC ACTCAATACA TTTGATATGA GCGCAGCAGA TGCAGAAGGA GATAGTCTGG TATATAGTTT AGTTTCACCA CAGGAATCAA ACGGCCGCAA CGTACAATGG CTTAGCGGAT ACAGCGGCAA CAGCCCCGTT CCGGGAACGG TTCCTATGCG TATTGACAAA CATACCGGGC AAATGATATT TAATCCTTCG CAGTCTGGTA CATTTCTTTT TGGCATCAGA GTATTCGAAT ACAGAAATAA CATATTGCTG AGTGAAGTAC GTAAAGATTT TCAGTTTAAT GTGCAGTCAT GCGCTCCAAA TAATAAACCT GTTATTGATT TTGGAAACAC CCCACTTCAT ACAGGCGCTG TTATTGAAGT ACCGGTCAAA GGTGAAAGCT GTATCCCCAT TTACATAACA GATGTTGATG CATCACAATT CGGCAGGAGT GAATTTATCA ATGTAAGAAC GACAAGTGAT TTTCCGTCAG GAAAATGGAA TTTTATCAAT CAATTAACAT TGAATCCGGT TGATGATACC ATTGTTTCGA ACCTGTGCAT CAATCCCTGT TTGATGGAGC AACTCAAAGC AACAACAGAT TTTAACTTTC ATATTATTAT TAATGATATA CGCTGCCCGG CACAATATGA TACGCTCGAT TTTATAGTAA AAGTGCTTGT GCCGCAAAAT GCAGTACCTG AAGTTTTCAT TTCTCCATCG CTTAATCCGC AGGTGGTGCG CGTTGATTCA CTGCTTACGT TTGATGTGTT TGGTGCAGAT GCAGATCCTG CAGATGTATT ATCCCTTACC ATACAGAATG CACAACGCAG CATGAATTTT CAAAATGTTT TTGACAGTAC TTCTACGATC CGTTCAACGT TTAGCTGGAT ACCCAACTGC AATGACCTGT ACCCGGGTAT ATATGATATT TATTTTTTAA TAAACGATAA CAGCTGTATT TATGGACACG CAGATACGGT GCAGCAACGC ATTGTTGTAT TCGAAAATGA AGTTTCCTTT GCTGGAATGG AGATTACAAA TTTGGTAACA CCAAACGGAG ACGGGTTAAA TGATTTTTAC CAGGTGCGTG ACATTCCCGT TGGCAACTGT TCAAAATATT TCAAAGGCAT AGAAATATAC AACCGCTGGG GATCACGTGT ATACTATAGT CAGGATAGGT TTTTTCAATG GTTTCCCAAG GAAAGTGATG GTATCTACTA TTATTCCATT GATCTGAATG ATGAAGTAAA AAAAGGATGG ATCCAAGTTA CCCGGTAG
|
Protein sequence | MRESMDKLLL RLLFFLVTAL FFQFNGYATH IVGGDIFIRW TGTDNRYQII LNKYVNERGY YQEIYGPDAI ETVTLEFSNG NNTTVIRTEY LALISNTLLV NNNNYCVNST IVKTSLQVYQ SVVTLNEFNS YDACKVRWVQ CCRSSDITNI AKLYSSSSNS YSQEQEIFLF TTKYEGKIKN TTPFFKRLNN EYFCLDALNT FDMSAADAEG DSLVYSLVSP QESNGRNVQW LSGYSGNSPV PGTVPMRIDK HTGQMIFNPS QSGTFLFGIR VFEYRNNILL SEVRKDFQFN VQSCAPNNKP VIDFGNTPLH TGAVIEVPVK GESCIPIYIT DVDASQFGRS EFINVRTTSD FPSGKWNFIN QLTLNPVDDT IVSNLCINPC LMEQLKATTD FNFHIIINDI RCPAQYDTLD FIVKVLVPQN AVPEVFISPS LNPQVVRVDS LLTFDVFGAD ADPADVLSLT IQNAQRSMNF QNVFDSTSTI RSTFSWIPNC NDLYPGIYDI YFLINDNSCI YGHADTVQQR IVVFENEVSF AGMEITNLVT PNGDGLNDFY QVRDIPVGNC SKYFKGIEIY NRWGSRVYYS QDRFFQWFPK ESDGIYYYSI DLNDEVKKGW IQVTR
|
| |