| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2473 |
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| Symbol | sdhA |
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| ID | 4184422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2842709 |
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| End bp | 2844622 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638072466 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_679069 |
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| Protein GI | 110638860 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0571713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTAG ATTCGAAAAT ACCAGACGGA CCGTTAGCTG AAAAGTGGAC CAAACATAAG
TTCAATCTTA AATTGGTAAA CCCTGCCAAC AAAAGAAAGT ACAACATTAT TGTTGTAGGT
ACTGGTCTTG CAGGTGCTTC TGCCGCTGCC TCATTAGCAG AACTAGGTTA CAACGTACAG
GCATTCTGCT TTCAGGATAG TCCGCGCCGT GCGCACTCCA TCGCAGCACA AGGCGGTATT
AATGCAGCAA AAAATTATCC GAACGATGGT GACTCTGTTT ACCGTCTGTT CTACGATACA
GTAAAAGGTG GTGACTACCG TGCGCGTGAA GGAAACGTTC ACCGTTTAGC GGAAGTCTCT
GTAAATATTA TTGACCAGTG CGTTGCACAG GGTGTTCCGT TCGCACGTGA ATACGGTGGC
TTATTAGATA ACCGTTCATT TGGTGGTTCT CAGGTATCCC GTACGTTCTA TGCCCGCGGC
CAGACAGGAC AGCAATTATT ATTAGGTGCT TACAGCGCAC TTAGCCGTCA GATTCACACA
GGCAAAGTAA AAATGCACAC GCGTGAAGAA ATGCTGGATC TGGTAATGAT TGATGGGGAA
GCAAAAGGTA TTGTAACACG TAACCTTGAA ACAGGTAAAA TTGATACACA CGCTGCACAC
GCCGTACTTC TTTGTACAGG TGGTTACGGT AACGTATTCT TCTTATCTAC AAACGCGCAG
GGTTCAAACG TAACTGCAGC ATGGAGAGCA CACAAACATG GTGCATTGTT TGCAAACCCA
TGCTTCACAC AAATTCACCC TACATGTATT CCGGTTTCAG GTGATCATCA GTCTAAATTA
ACATTGATGT CTGAATCACT TCGTAACGAT GGCCGTGTAT GGGTTCCGAA AGCAAAAGGC
GATAAACGTA AAGCAAGCGA AATTCCCGAA GACGAAAGAG ATTACTTCTT AGAAAGAAAA
TACCCGTCAT TCGGTAACCT TGTTCCGCGT GACGTGGCAT CACGTAACGC AAAAGAACAA
TGCGATGCAG GCAAAGGTGT TGGTACAAGC GGCTTAGCTG TTTATCTTGA CTTTGCTGAA
TCCATCAGCC GTTTGGGCGA AGACACCGTA CGTGCCAGAT ACGGCAACTT ATTTGACATG
TATGCGCAGA TCACCGGTGA GAATCCGTAT AAAGAACCAA TGCGTATCTA CCCTGCCGTT
CACTATACAA TGGGTGGTCT TTGGGTTGAT TACAACCTGA TGACTACGAT TCCAGGTTTG
TATGCATTAG GTGAAGCGAA CTTCTCTGAT CACGGTGCAA ACCGTTTGGG AGCATCAGCA
TTAATGCAAG GTTTGGCTGA TGGTTACTTT GTAGTGCCAT ATACAGTTGG TGATTACTTA
GCTAAGATCG GACCGAAAGC GGTAGATACG AAACACCCTG CATTTGCTGA AGCAAAAGCG
AAGGTTGAAG AACAGACGAA AAAACTATTA GCAATAAAAG GAACGAAAAC GGTTGCCGAA
TACCACCGTG AATTGGGCCA CATCATGTGG GAATACTGCG GTATGGCCCG TAATGAAGCA
GGTCTGAAAA AAGCACAGGT ATTGATTCAG GAATTACGTG CCGATTTCTG GAAGAATGTA
AACGTAACCG GAACAAACGA AGAACTGAAC CAGCAGCTTG AGCGTGCAGG CCGTGTAGCT
GACTTCCTGG AACTTGGAGA GTTGATGGTG GTAGATGCCT TGAACCGCTC TGAATCCTGT
GGTGGTCACT TCCGTGAAGA ATCACAGACA GAAGAAGGCG AAGCATTGCG TAACGATGAC
GATTTCTGCT ACGTAGCTGC ATGGGAATAC AAAGGCGATA ATCAACCGGA AGTATTACAC
AAAGAAGTAT TGAATTTTGA AAGTGTTAAA TTAACTCAAA GAAGTTATAA GTAA
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| Protein sequence | MILDSKIPDG PLAEKWTKHK FNLKLVNPAN KRKYNIIVVG TGLAGASAAA SLAELGYNVQ
AFCFQDSPRR AHSIAAQGGI NAAKNYPNDG DSVYRLFYDT VKGGDYRARE GNVHRLAEVS
VNIIDQCVAQ GVPFAREYGG LLDNRSFGGS QVSRTFYARG QTGQQLLLGA YSALSRQIHT
GKVKMHTREE MLDLVMIDGE AKGIVTRNLE TGKIDTHAAH AVLLCTGGYG NVFFLSTNAQ
GSNVTAAWRA HKHGALFANP CFTQIHPTCI PVSGDHQSKL TLMSESLRND GRVWVPKAKG
DKRKASEIPE DERDYFLERK YPSFGNLVPR DVASRNAKEQ CDAGKGVGTS GLAVYLDFAE
SISRLGEDTV RARYGNLFDM YAQITGENPY KEPMRIYPAV HYTMGGLWVD YNLMTTIPGL
YALGEANFSD HGANRLGASA LMQGLADGYF VVPYTVGDYL AKIGPKAVDT KHPAFAEAKA
KVEEQTKKLL AIKGTKTVAE YHRELGHIMW EYCGMARNEA GLKKAQVLIQ ELRADFWKNV
NVTGTNEELN QQLERAGRVA DFLELGELMV VDALNRSESC GGHFREESQT EEGEALRNDD
DFCYVAAWEY KGDNQPEVLH KEVLNFESVK LTQRSYK
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