| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2469 |
|---|
| Symbol | fabD |
|---|
| ID | 4184418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2837727 |
|---|
| End bp | 2838602 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638072462 |
|---|
| Product | [Acyl-carrier-protein] S-malonyltransferase |
|---|
| Protein accession | YP_679065 |
|---|
| Protein GI | 110638856 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0181872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT ACGTTTTCCC TGGTCAGGGG TCTCAATTTT CAGGAATGGG TAAAGACCTT
TTTGAAAACT CTGCGAAAGC AAAAGAATTA TTTCTTCAGG CAAATGATAT TCTGGGATTC
GATATTACGA AAGTAATGTT TACAGGTACA GACGAAGAAT TAAAGCAAAC GAATGTAACT
CAACCGGCTA TATTTATTCA TTCTGTTATA CTTGCTAAGA TCAGCGAAAC ATTTGCACCT
GAAATGGTGG CAGGTCACTC GTTGGGCGAG TTTTCTGCCT TAGTTGCAAA TGGTACATTA
TCTTTTGAAG ATGGATTAAA ATTAGTATCC AAGCGTGCTG CTGCCATGCA GAAAGCATGT
GAACTTGTAC CGGGTACAAT GGCAGCTGTA TTGGCCTTAG CGGATGAAAA GGTTGAAGAG
ATATGTGCAT CTATTGCAGA TGAAGTTGTT GTCGCAGCGA ATTATAACTG TCCGGGACAA
TTAGTTATTT CCGGCAGTGT AAAAGGAATA GAAAAAGCAT GTGAGCTGAT GAAAGCAGCC
GGTGCAAAAC GTGCGTTGGT ATTACCTGTT GGTGGCGCAT TCCATTCGCC TTTAATGGAA
CCTGCCCGTA TTGAGTTAGA AGACGCAATT AAAAATACAT TGTTCAGCAA GCCTGCATGT
GCCGTTTACC AAAACGTAAA TGCCAAGCCT TCAACAGATG TTGAAGCAAT CAAATTAAAC
CTGATTGCTC AGTTAACGGC TCCGGTCCGC TGGACACAGT CTGTACAGAA TATGGTAAAA
GATGGCGCAA CAACGTTTGT TGAATGTGGT CCGGGTAAAG TATTACAAGG TCTTGTAAAG
AAAATTGAAT CCGGCACGGA GGTAGCTTCG ATTTAA
|
|---|
| Protein sequence | MKAYVFPGQG SQFSGMGKDL FENSAKAKEL FLQANDILGF DITKVMFTGT DEELKQTNVT
QPAIFIHSVI LAKISETFAP EMVAGHSLGE FSALVANGTL SFEDGLKLVS KRAAAMQKAC
ELVPGTMAAV LALADEKVEE ICASIADEVV VAANYNCPGQ LVISGSVKGI EKACELMKAA
GAKRALVLPV GGAFHSPLME PARIELEDAI KNTLFSKPAC AVYQNVNAKP STDVEAIKLN
LIAQLTAPVR WTQSVQNMVK DGATTFVECG PGKVLQGLVK KIESGTEVAS I
|
|---|
| |