Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2407 |
Symbol | |
ID | 4183837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2769445 |
End bp | 2769876 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638072402 |
Product | RNA binding protein |
Protein accession | YP_679005 |
Protein GI | 110638796 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCT TTGTTGGAAG CCTTCCATTT AGTTTAGAAG AAAACGAATT AAGAGAATTT TTTGAAGAGT ATGGTGAAGT TAGTTCAGTG AAAATTATCT CTGACAAATT CACAGGAAGA AGCAAAGGCT TCGGTTTTGT TGAAATGCCC GATGATGCAG CTGCACAAAA AGCTATTGAC GAATTAAATG GTGCTGAAGT TAACGGACGT ACAATCGTTG TTAACAAATC AGAAGAGAAA AAAGATGGTC CAAGAAGAAG TGGATTTAGT GGTGGCGGCA ACCGTGGCGG TGGCGGCGGT TACAGCGGCG GTGGTAATGG CGGCGGCGGT TACGGTGGAA ACCGTAGCGG TGGCGGTGGT TACGGCGGTG GCGGTAACAG CAGAGGTTTC GGCGGAAGCG GAACTGGCCG TAACAGCAGA GGTGATCGTT AA
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Protein sequence | MNIFVGSLPF SLEENELREF FEEYGEVSSV KIISDKFTGR SKGFGFVEMP DDAAAQKAID ELNGAEVNGR TIVVNKSEEK KDGPRRSGFS GGGNRGGGGG YSGGGNGGGG YGGNRSGGGG YGGGGNSRGF GGSGTGRNSR GDR
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