Gene CHU_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2407 
Symbol 
ID4183837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2769445 
End bp2769876 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID638072402 
ProductRNA binding protein 
Protein accessionYP_679005 
Protein GI110638796 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCT TTGTTGGAAG CCTTCCATTT AGTTTAGAAG AAAACGAATT AAGAGAATTT 
TTTGAAGAGT ATGGTGAAGT TAGTTCAGTG AAAATTATCT CTGACAAATT CACAGGAAGA
AGCAAAGGCT TCGGTTTTGT TGAAATGCCC GATGATGCAG CTGCACAAAA AGCTATTGAC
GAATTAAATG GTGCTGAAGT TAACGGACGT ACAATCGTTG TTAACAAATC AGAAGAGAAA
AAAGATGGTC CAAGAAGAAG TGGATTTAGT GGTGGCGGCA ACCGTGGCGG TGGCGGCGGT
TACAGCGGCG GTGGTAATGG CGGCGGCGGT TACGGTGGAA ACCGTAGCGG TGGCGGTGGT
TACGGCGGTG GCGGTAACAG CAGAGGTTTC GGCGGAAGCG GAACTGGCCG TAACAGCAGA
GGTGATCGTT AA
 
Protein sequence
MNIFVGSLPF SLEENELREF FEEYGEVSSV KIISDKFTGR SKGFGFVEMP DDAAAQKAID 
ELNGAEVNGR TIVVNKSEEK KDGPRRSGFS GGGNRGGGGG YSGGGNGGGG YGGNRSGGGG
YGGGGNSRGF GGSGTGRNSR GDR