Gene CHU_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2310 
SymbolarcB 
ID4185221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2677207 
End bp2678409 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content38% 
IMG OID638072310 
Productsensor histidine kinase/GAF domain-containing protein 
Protein accessionYP_678913 
Protein GI110638704 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.40578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTG CAGCAATTCC CGCTAATGAA GCACAGCGCC TGGAGGCATT GAGAGCCTAT 
TCTATTCTGG ATACCTTACC TGAAAAGGAT TTTGAAGATA TAACAAAAAT TGCTTCAGAA
ATCTGTCAGA CACCGATTTC CATGATTACC CTGATTGATG CAGAAAGGCA ATGGTTTAAA
TCCAAAATAG GTATTAATGA TACGGAAACA CACCGGGATT ATGCTTTTTG TGCACACGCG
CTGAATAAGC CGGATGATAT ATTGAATGTA ACGGATTCAA GAGAAGATAA CCGTTTTTCA
GATAATCCTT ATGTGACAGG AGATCCGAAT GTAGTGTTTT ATGCGGGTGT ACCGCTTGTG
AATGAAGACG GTTATGCGCT TGGTACCATT TGCGTAATTG ATAATACACC ACGGGAACTG
AATGAAATGC AGCTGAACTC GCTGCGTGCA TTATCCAATC AGGTTGTAAA GCTTTTTGAA
CTACGGAAAG CAAACCGTCT GCTTATAGAA ACTCAGCAGG AAATACGCAA TCGAAATAAA
GATCTGGAAC AATTCGGATA TGTGATTTCA CACGATATAA AATCACCGCT GCGGAATATT
ATTTCGCTGG CAGGCATTTT AAAAAAGAGT CTGTCTGGAA AGATAGATAC GTACGAAGCA
GAAGTGATTG AGCATTTGCT TAATACATCG GTTCGACTGA AATCACTGAT TGATGGTATC
ATTGCACATT ACATGGATAT TAATATTGAT ACACTGAATA AAAAAAATAT TCAGGTAACT
GCTTTTCTGG AAGATACAAT AGCCTTGATT GATCCGCGTA AAGAACATAC AATTACCCAT
CAATCCGACG TGGAACTAAT CGTAACAAAT GAAGTTGCCT TAAAGCAGAT CGTAATTAAC
CTGATTACCA ATGCCATTAA ATACAATGAT AAAGACCATG TGCGTATTGA AATAAGCGTA
ACTGCCCGGA ACGATTATTA TGAATGGGCC ATTTCTGATA ACGGCCAGGG GATTGATAAA
GCTCAGTTCG ATAAAATATT TGAAACATTC AGTACATTAG GTACAAAAGA TCGCTTCAAT
AATTCCGGAA CAGGTATTGG TTTGTCTACC GTTAAAAATT TAGTCGGAAA GCTTGGTGGA
TTTATCCGTG TGGATTCTAA GGTTGGTTCC GGCTCGGTAT TTACATTCAG TATTAAAAAA
TAA
 
Protein sequence
MEIAAIPANE AQRLEALRAY SILDTLPEKD FEDITKIASE ICQTPISMIT LIDAERQWFK 
SKIGINDTET HRDYAFCAHA LNKPDDILNV TDSREDNRFS DNPYVTGDPN VVFYAGVPLV
NEDGYALGTI CVIDNTPREL NEMQLNSLRA LSNQVVKLFE LRKANRLLIE TQQEIRNRNK
DLEQFGYVIS HDIKSPLRNI ISLAGILKKS LSGKIDTYEA EVIEHLLNTS VRLKSLIDGI
IAHYMDINID TLNKKNIQVT AFLEDTIALI DPRKEHTITH QSDVELIVTN EVALKQIVIN
LITNAIKYND KDHVRIEISV TARNDYYEWA ISDNGQGIDK AQFDKIFETF STLGTKDRFN
NSGTGIGLST VKNLVGKLGG FIRVDSKVGS GSVFTFSIKK