Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2291 |
Symbol | |
ID | 4186678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2662094 |
End bp | 2663140 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638072291 |
Product | DNA topoisomerase IB |
Protein accession | YP_678894 |
Protein GI | 110638685 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3569] Topoisomerase IB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0533881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.067771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAG CTGTGAAGGA CTACCAGGAG AGTGCTAAAT TAGCAAATCT TGTATATGTA AATGATAAAG AAGAAGGTAT TGCACGGAAA AAAAATAATG GAAGATTTTC ATATTATTTG AAAGACAAAA AAATATCTGA TAAAAAAATA TTACAACGCA TCAACCAATT GGTTATTCCG CCGGCCTGGG AAAATGTATG GATTTGCCAA AATGAAAACG GACACATTCA GGTAACAGGT GTTGATGCTA AAAACAGAAA GCAATATCGT TATCACCCTG CATGGTCTAA TCTGCGCGAT CAGACAAAAT ATTGCAGGCT GCGTGATTTC TCGCATGCGC TTCCTGAAAT AAGAGCACGT ATAAAAGAAG ATCTATGCCA ACGTGGGTTT CCTAAAAATA AAGTTCTTGC TGCTGTTGTA AGCATCATGG AGTCTACAAG TATTCGTGTA GGGAATAGCA TGTATGAAAA ACTATATGGT TCATATGGCT TATCAACAAT GAAAGACAGG CATGTTAAAA TCCAGGGCCA GGAAGTTCAA TTTTCGTTCA AAGGGAAAAA AGGTGTTTAC CATAAAATAA GTTTGAAAAG TAAAAAACTG GCACATATTG TCTCTCAATG TAAAGACATT CCCGGTAAGG AATTGTTCCA GTACTTTGAT GAAAAGGGAA ACAATCATTC CATTGATTCA GGAGATGTAA ACGATTACAT ACGTGAAATA TCGGGTGGTG ATTTTACAAG CAAAGATTTC CGTACCTGGA CCGGAACAGT AAAATGCCTG CAGGCATTTT CAAACCTGGG TCACGGTGAA AATAACACAC AAGTAAAAAG GTTGATGAAT GAAGCAATGG ATATTGTAGC ACATCAATTA GGGAATACAC GCAGTGTTTG TAAAAAACAT TATATTCATC CCGGGATCCT GGCTGATTAT GAAAGCGGGA AACTGGAAAA ATACATTAAG CAGATTCAGG AAATTGAAAT GGATTGTAAT TCCGATGCAA TCATTACACC GACAGAAAAA GTACTGGTAA AAATTCTTGA ACATTAA
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Protein sequence | MRKAVKDYQE SAKLANLVYV NDKEEGIARK KNNGRFSYYL KDKKISDKKI LQRINQLVIP PAWENVWICQ NENGHIQVTG VDAKNRKQYR YHPAWSNLRD QTKYCRLRDF SHALPEIRAR IKEDLCQRGF PKNKVLAAVV SIMESTSIRV GNSMYEKLYG SYGLSTMKDR HVKIQGQEVQ FSFKGKKGVY HKISLKSKKL AHIVSQCKDI PGKELFQYFD EKGNNHSIDS GDVNDYIREI SGGDFTSKDF RTWTGTVKCL QAFSNLGHGE NNTQVKRLMN EAMDIVAHQL GNTRSVCKKH YIHPGILADY ESGKLEKYIK QIQEIEMDCN SDAIITPTEK VLVKILEH
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