Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2216 |
Symbol | yheS |
ID | 4185776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2576500 |
End bp | 2578398 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072217 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_678821 |
Protein GI | 110638612 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.812248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACAT TGAATAATAT CTCCTACTTC ATTGGCGGTC GCGCCCTATA CAGAAATATC ACCATGCAGA TAAAACCCAA AGATAAAATC GGATTGATCG GTGCAAATGG CACCGGCAAG TCAACGTTAT TAAAGGTAAT TACAGGTGAG TATAGTGCGG ATGAAGGGAA CATTCAAAAA AGCAAAGACT GTACCATTGG TTTCTTAAAC CAGGATCTGC TATCCTTCCA GAGTGATGAA AGTATTTTAG CGGTAGCCAT GGAAGCTTTT GAAGAAGCGA CCAAAATTCA AATCCAGATG GATCAATTGA TACATAAAAT GGAAACGGAT TATACCGATG ACATGATTGA AAAATTAAGT GCACTTCAGG AACGTTTTCA GGCACTTGAA GGATATACCA TACAATCCAA AGCGGAAAAA ATTCTGGAAG GTTTAGGTTT TTCAACCAAC GATCTGAACA AGCCCTTAAA GAATTTTTCC GGAGGCTGGA GAATGCGGGT AATGCTTGCC AAAATGCTGC TTGCCAAGCC TGCACTGCTC ATGCTCGATG AACCTACCAA TCACCTGGAT CTCCCATCCA TACAATGGCT GGAAAACTAC CTGCGCGATT ATGAAGGTGC TGTAATTGTT GTTTCGCACG ATAGAGAATT TATTGATAAC TGTGTGAAAA CAATTGTTGA AGTAGCCCAG CAAACATTAA ATATCTATGC CGGGAATTAT AGTTTTTATC TGGAAGAAAA AGAATTAAGA TCGGAAATTC AAAAAGCTTC TTTTGAAAAT CAACAGGCAA AAATTAAACA AACGGAACGT TTCATTGAAC GCTTCAAAGC CAAAGCAAGT AAATCCACAC AGGTACAGTC CAGAGTGAAA GCGCTCGACA GAATGGATAT GATTGAAGAT GTGGTGGAAG ATAATCAAAC CGTAAACTTC CGTTTCACAT TTAAAACACA ACCGGGCAGA GTAATTAATG AATTAAAGAA TATTTCCAAA AGTTATGGAG ACTTACATAT TCTTAAAAAT ACTGATGCAA AGATTGAGCG TGGCGACAAA ATCGCATTGA TTGGTGCAAA CGGTAAAGGC AAATCAACTG TACTGCGCAT CCTAACCGGC GGTGAAAGTG CAGAAGGTGA AGTGGCACTT GGTCATAATG TAATTTCTTC TTTTTATGCG CAGCATCAGC TGGAATCATT AAATATAAAT AATGAGATAT TAGAAGAATT GAAGCAGCAT GGCTCTAACC GGACAGAAAC AGAATTACGG AATGTACTCG GCTGCTTCCT GTTCTCCAGT GATGATGCTT TCAAGAAAAT TAAAGTACTT TCAGGTGGAG AAAAATCACG TGTTGCATTA GCAAAGACCT TAATCTCTGA TGCCAATTAT TTATTACTGG ATGAACCTAC CAATCACCTG GATATGGTAT CTGTTAATAT TTTGATTCAG GCATTACAGC AATATGAAGG AACATTGATC GTTATCAGTC ACGACAGACA CTTTGTTTCT AAAGTTGCAA ACAAAATCTG GTACATCGAA GATCAGGAAA TCAAAGTATA TCCGGGAACA TACGATGAAT ATAAATACTG GATCGAAAAT ATTAAAACTA CCGGTGCAAC GGCCGCTCCC AAGGAGAAGA AAGAACCTGT AGCTGAAAAG AAAAAAGCTC CGGCACCAGC TGCTGATCCG GAAATAAAAA AAATCCAACA GCAGATTTCA CGTTTGGAAG AACAGATAAC AGCACTTGAA AAGAAAAAAA CAGCCGCAGA AGAACATCTC GCTAAACCGG AAGTATACGG CAATCCGGAT CAATTAGCAA AAGCCAGCAT GGAATTTGAT AAAGTAGATA AAGAACTTTT ACAGCTGCAG ACGGAATGGG AAATGTGTGT TGAAAAACTG GAACAATAA
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Protein sequence | MLTLNNISYF IGGRALYRNI TMQIKPKDKI GLIGANGTGK STLLKVITGE YSADEGNIQK SKDCTIGFLN QDLLSFQSDE SILAVAMEAF EEATKIQIQM DQLIHKMETD YTDDMIEKLS ALQERFQALE GYTIQSKAEK ILEGLGFSTN DLNKPLKNFS GGWRMRVMLA KMLLAKPALL MLDEPTNHLD LPSIQWLENY LRDYEGAVIV VSHDREFIDN CVKTIVEVAQ QTLNIYAGNY SFYLEEKELR SEIQKASFEN QQAKIKQTER FIERFKAKAS KSTQVQSRVK ALDRMDMIED VVEDNQTVNF RFTFKTQPGR VINELKNISK SYGDLHILKN TDAKIERGDK IALIGANGKG KSTVLRILTG GESAEGEVAL GHNVISSFYA QHQLESLNIN NEILEELKQH GSNRTETELR NVLGCFLFSS DDAFKKIKVL SGGEKSRVAL AKTLISDANY LLLDEPTNHL DMVSVNILIQ ALQQYEGTLI VISHDRHFVS KVANKIWYIE DQEIKVYPGT YDEYKYWIEN IKTTGATAAP KEKKEPVAEK KKAPAPAADP EIKKIQQQIS RLEEQITALE KKKTAAEEHL AKPEVYGNPD QLAKASMEFD KVDKELLQLQ TEWEMCVEKL EQ
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