Gene CHU_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2213 
Symbol 
ID4185773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2572715 
End bp2574022 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content39% 
IMG OID638072214 
Productcytochrome c, mono- and diheme variant 
Protein accessionYP_678818 
Protein GI110638609 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA TTTCGGAAAA AACAGTGTTA AACATGTCCA GATTAACTAT TCTGATGAGT 
AGAATTTCGA GATCAATCCT TACGTTAGTA GCATTCTCTT TTGTAACTCT AACTTCTTCA
TTTGCAGAGG TTAAAGATTC ATCAGCCTCT GCTACAGCGG AAACTCCGGC ACTTGATGGC
AAAGGAGAGC AATTATTCAA GGAAAATTGT AAATCATGTC ACAAAATCCA TGAAGAATCA
GTAGGACCTG CTTTGTCAGG TGTTACGAAA CGCAGATCAG CTGACTGGTT ACATCAGTGG
ATTAAAAACA ATGCCGTGTT TAGAGCTTCA GGCGATAAAG ACGCTATTGC TATTTATGAG
AAGTATAAAA AAGCAGAAAT GACTGCTTTC CCTACTTTCA CAAATGAAGA CATTGATGCG
ATTATAGCAT ATGTTGAATC CGTTCCTAAA GAGGATCCTG CTAAATTAAA AGGTACTGAA
GATCCTACCA AGCCTAAAGG CGAAACAGAA GGCGGACAAT ACGATACAAT CATTCTTACC
TTGATCGTAG TTGTATTGGT TCTTGTGCTT GTGGCAATGC TTGTTTTCTT ATCTGTAATT
AAACGTTACT TAAAAGAAAA AGAAGCAGGC CTGGATGCAG AAGACAGAGA GTTAGTAGAT
CAGAAATTTG ATATTAAAGC GCTTGTTAAG AGCAAAGCAT TTATAGCAAT TGTTGTTTTA
TTATTTGTTG GTGCAACGGT TCGTTCTTGC TGGATCGGTG CTCAGGAAGT AGGCGTAGAA
CAAAACTATG CACCGGTGCA GCCGATTGCA TTCTCTCACA AATTGCATGC AGGTGACAAC
AAGATCAACT GTAACTATTG CCACACCGGG GCGTACAAAG GCAAGCAATC AAATATTCCT
TCATTAAATA TCTGTATGAA CTGTCATACC TATATCAAGA AAGGTCCTCT TCATGGTGAA
ACTGAAATTG CTAAATTGGT AGATGCGTAC GAAAAAGGTA CTCCGATTAA ATGGGTACGT
GTACACAACT TACCTGATCT GGCTTACTTC AATCACTCTC AGCACACACA GGTTGCAGGC
ATTGAATGTC AGAAATGTCA CGGTCCGATT GAAGAAATGG AAGTTGTTAA ACAATATTCT
AACTTAACAA TGGGCTGGTG TATTAACTGT CACAGAGAAA CAGCTGTAAA CAGTGAAGAT
AATGCATACT ATGATCGCTT GTTGAAAGTT CACGAGGAGT CTAAGAAAAA AGGCAATATG
ACTGCTGAGG AAATCGGTGG ATTGGATTGC TCTAAATGTC ACTATTAA
 
Protein sequence
MAKISEKTVL NMSRLTILMS RISRSILTLV AFSFVTLTSS FAEVKDSSAS ATAETPALDG 
KGEQLFKENC KSCHKIHEES VGPALSGVTK RRSADWLHQW IKNNAVFRAS GDKDAIAIYE
KYKKAEMTAF PTFTNEDIDA IIAYVESVPK EDPAKLKGTE DPTKPKGETE GGQYDTIILT
LIVVVLVLVL VAMLVFLSVI KRYLKEKEAG LDAEDRELVD QKFDIKALVK SKAFIAIVVL
LFVGATVRSC WIGAQEVGVE QNYAPVQPIA FSHKLHAGDN KINCNYCHTG AYKGKQSNIP
SLNICMNCHT YIKKGPLHGE TEIAKLVDAY EKGTPIKWVR VHNLPDLAYF NHSQHTQVAG
IECQKCHGPI EEMEVVKQYS NLTMGWCINC HRETAVNSED NAYYDRLLKV HEESKKKGNM
TAEEIGGLDC SKCHY