| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2197 |
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| Symbol | atoS |
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| ID | 4184161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2553512 |
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| End bp | 2557216 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072198 |
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| Product | two-component sensor histidine kinase (sensor protein AtoS) |
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| Protein accession | YP_678802 |
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| Protein GI | 110638593 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.993549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT TTAAGTCTTT CTCATCTTTT TTAACCTTCC TGCGTTGGGT CATACTTTCA
TTAGGCGTAA GCTTAACGTT ATTACTGATT TTTAGAACTG CATGCATCCA TCTGGATCAG
AATATTTATT ATTCTACTGT TTCAAACCGC GTGAGTCATT CAATGACTGA AACAGAAATT
CAAAATAAAA ACATCTTAAA AAAAATAGGA GCGAAAGAAA TTTCTTTTTC GGCATTTAAT
AAAATAAAAA AAAGCAATCC ATTTTTTGTG TATGAAGAAG GCCGCTTAAT TTATTGGTCT
GAATCTGAAA ATATACCCAA TTATAAATTT TTAAAAGGCG TAAATAAATG GAGTTATATC
AGTAACAGCA CCGGTAAATA CCTGTCTTGC CGCGATACGG CTTCCATGGA TGGGAAAACA
ATAGAAGTAT TCTCGTTGCT GGAACTTGAA CGCATTTATT CCGTTGAAAA CACCTTTATA
AACAATCACA CAAACCCCTT GCTGTTTAAG CATATTCCGG TACGTATTTA TATATCAGGG
AAACAAACAG GGCAGGTGAT AGGCCGGCAC GGGCAGTATT TATGCAGTTT TGAATGCAGC
TCATCGCAGC AGGATTTTAT ATACGGCACA TTTGCTACCG TTATTTATGT GTTACTCGTG
CTGCTGGTAT GGGTGTATTT TATCACGGAA GTATTATGGA AACGCAAACG TAAGGTGATG
CATGTACTGT TTCGCATCGC TTTATTTATA AGTTTCCGGC TGCTTTTGAT ACTGTTAAAT
CTGCCGGAAT ATTTTTCTTC GGATGAAATC TTTTCATCAG GTTATTATGC TTCTTCTTTT
TTCAGCGAAT CAATATTTGA TCTGGTACTC AATATATTTT TCTCTGTTTA TTTATTGTTT
GAAATCATTT CAGTTGTTCA GCACCGCAAG ATCTACCGAT TTATTTATAT CAATAAAAAA
ACACTTATGG TTCGGATCAA ACTCGGTTTA AGTATTCTGC TTTCCTGGGT TTTTGCTGTA
ACTTATTATT TGATGATTCG CAGTATCGTA TCCAATTCTA CGGTATCTCT GAATCTGATT
GAGGATTTAG ATGTTTCGGT ACTGCGTATT TTATTAGTGG TATCAATCAT TTCAATTTCA
TTTGTGTTCT TTTATTTAGT GCATTTAACA CTGCAGGTTT TATGGAGGTT GTATAAACGC
TATAGAATTG ATTCCCCCAT GCAGCTTATT ACATTGTATC TGATTTTTAT TGCAATAAGT
GCCTTTATTG ATCCGCAGCT GGCGGTTGTC AGTATGTGCT TAACGGTGTT TAGTTTATTG
AGTTTACTTC AGGGGTATCC GGCTATTTTA GGGAAAATGA AATACCAATC TTTTATTTAC
ATTTTTTTAT TTTCCCTGGT TTCTTCTTTA ATGATTGGTA CGGCTATTTT TTATAACGGC
AGAAATAAAG TGAATCAGCA GATGAACCGC TATGGCGAAC GTTTGCTGTA TGATCGGGAT
GAAATAACAG AATTTTTATT GCAGGAAGCT TCTATCAACA TTCAACGCGA TGGGTTTATA
CGTGAAAAGA TCTTATCGCC TTTTTCTGAT CTGACAATTG TAAAAGATAA AATTCAGAAG
AAGTATCTGT CCAATTATTT TAATGATTAT TCCGTTCGCG TAGAATTGCT GGATGCTACG
GGAGAGCCTT TCAATACACA GACCGGACAG GTAACCTACA ACGAATACTA TAATACCGTT
TTAGTGAAAT CTACCTATCT CAATAAACTT GATCTGTATA GCTACAACGA TCACATAACA
AATACACGGC GCTATATTTC TGTGAATAAG ATTACTTCTT CGAATATCGT AATTGCTTAC
ATCATTATTG AACTGGAATC AGGTAAGTAT AGTAAAAACA GCGTATTCCC TGAATTGGTA
CTGGATCAGA AACAAGTTCA GGAAAATTAT AAAGATTTCG ATTATTGTAT TCTGAATAAT
GGGAAATTGG AAACCAGTTA TGGCTATTTT AATTACGATC AGCAGTTCAT AAATTTTATC
CGCAATAAAC GCAATAATAA TATACAGGAA TGTACGTATG AAGGGTATTA TCACATCTGG
TTAAAAGGAA CGGATAATGC CTGGATCGTA GTAAGTAAGC CGTATGGTAT TATGGATATA
TTGATTTCAA ATGCATCCCT GTATTTTTTA TTCCATATTG TAGGTATTCT GTTTATTGTA
CTTGTGCACG TGTACCGCAT AAATCTGCAG AAACGCCAGG TCAGTTATGC AACCAAGGTA
CAGATCTATT TAAATCTTGC CTTTTTCATT CCGCTTTTAT TGGTCAGTGT TATAACCCTG
GGTTATGTAA ATAAAAACTA TGAACAATCG CTGATGAATC GGTTTATCAA TGATTCAGAT
AAATTGTCTG CCTTGATATC ATCACGTACG ATTATTCAGG ATCGGATCAG TAAAGCTTCG
GTAGGTGAGT TATTGCTGGA GTCTGATCTG ACACGGGTGG AACAGCTGGA TATTAATATC
TACGGAACGA ACGGATATTT ACTGGCAACA AATCAACCTG AAGTGTTCCG GAAAGGAATT
CTTTCAAGCT ATATACAGCC CAGTGCATAC GCGGCACTTC TCGAAAGTAA AAACCAATAT
ATTGTAACTA CAGAACAAAC GGGTTCATTA TCCTACAAAT CCATTTACCG GTTGATACGT
GTTCCGGGAA CCGGAGCCAT TGCGGGTATT ATACATTTGC CATTCTTTGA ATCAAAGGAA
GATATTGTGC GGCAGATATC GTCGTATCTG AAAATTATTC TGAACATCTT TTCAATCGGT
TTTATCATTT TATTATTGCT TTCGTACCTG GTTGCCTTTT ATTTAACATA TCCTTTAAAG
CTTATTACCA TAGGGATTAA AAAAACAGGC TTGTATGATA ATGAACCGAT TCAATGGCAG
TCTTCCGACG AAATAGGACG TCTGGTTCAG GAGTATAATT CCATGCTTAT AAAGCTGGAT
GAAAGTAAGT TAATACTGGC AAACTCAGAG AAGGAGAGTG CCTGGAGGGA AATGGCCAGA
CAGGTAGCGC ACGAGATCAA AAATCCGTTA ACACCCATGA AGTTAAAACT GCAGTATCTA
TTGCAGCGCT TTAATAATGG CGGATCAAAG CCTACGGATG AAGAATTAAA ACAATCTTTT
CAGACAATCT TAACCCAGGT TGATTCGTTA AGTGAGATAG CAAGTTCTTT TTCATCTTTT
TACAAATTGC CTGAATTGCA GCTTGAAAAA GTTGAATTGA ATTTATTAGT AAAAGAACTG
GTCGTGCTGC ATCAGCAACA GGATCAATCG GGCATACAGG CGCACATACC GGCAACACCA
ACATTTATAG TGGCAGACAA AACAATGATT GTAAATATTT TAAACAATTT ATTGTTGAAT
GCAATACAAA GCATACCGGA TATGCGTACG CGTAATATTG ATGTGTATGT GAGTCAAAAA
GTAGATCGTG TGCTGATAGA AATCCGGGAT AATGGAACGG GTATACCAAC AGAACTTCAA
AGCAAAATTT TCGTGCCGTA TTTCAGTACA AAATATTCAG GTTCAGGCAT AGGTTTGGCA
CTTGCAAAAC GATTGGTTGA GGATATGAAA GGCACCATAT GGTTTGAAAC TACAGCAGAT
AAAGGCACTT CATTTTATAT AGAAATGCCT TACTATAACG AATGA
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| Protein sequence | MLPFKSFSSF LTFLRWVILS LGVSLTLLLI FRTACIHLDQ NIYYSTVSNR VSHSMTETEI
QNKNILKKIG AKEISFSAFN KIKKSNPFFV YEEGRLIYWS ESENIPNYKF LKGVNKWSYI
SNSTGKYLSC RDTASMDGKT IEVFSLLELE RIYSVENTFI NNHTNPLLFK HIPVRIYISG
KQTGQVIGRH GQYLCSFECS SSQQDFIYGT FATVIYVLLV LLVWVYFITE VLWKRKRKVM
HVLFRIALFI SFRLLLILLN LPEYFSSDEI FSSGYYASSF FSESIFDLVL NIFFSVYLLF
EIISVVQHRK IYRFIYINKK TLMVRIKLGL SILLSWVFAV TYYLMIRSIV SNSTVSLNLI
EDLDVSVLRI LLVVSIISIS FVFFYLVHLT LQVLWRLYKR YRIDSPMQLI TLYLIFIAIS
AFIDPQLAVV SMCLTVFSLL SLLQGYPAIL GKMKYQSFIY IFLFSLVSSL MIGTAIFYNG
RNKVNQQMNR YGERLLYDRD EITEFLLQEA SINIQRDGFI REKILSPFSD LTIVKDKIQK
KYLSNYFNDY SVRVELLDAT GEPFNTQTGQ VTYNEYYNTV LVKSTYLNKL DLYSYNDHIT
NTRRYISVNK ITSSNIVIAY IIIELESGKY SKNSVFPELV LDQKQVQENY KDFDYCILNN
GKLETSYGYF NYDQQFINFI RNKRNNNIQE CTYEGYYHIW LKGTDNAWIV VSKPYGIMDI
LISNASLYFL FHIVGILFIV LVHVYRINLQ KRQVSYATKV QIYLNLAFFI PLLLVSVITL
GYVNKNYEQS LMNRFINDSD KLSALISSRT IIQDRISKAS VGELLLESDL TRVEQLDINI
YGTNGYLLAT NQPEVFRKGI LSSYIQPSAY AALLESKNQY IVTTEQTGSL SYKSIYRLIR
VPGTGAIAGI IHLPFFESKE DIVRQISSYL KIILNIFSIG FIILLLLSYL VAFYLTYPLK
LITIGIKKTG LYDNEPIQWQ SSDEIGRLVQ EYNSMLIKLD ESKLILANSE KESAWREMAR
QVAHEIKNPL TPMKLKLQYL LQRFNNGGSK PTDEELKQSF QTILTQVDSL SEIASSFSSF
YKLPELQLEK VELNLLVKEL VVLHQQQDQS GIQAHIPATP TFIVADKTMI VNILNNLLLN
AIQSIPDMRT RNIDVYVSQK VDRVLIEIRD NGTGIPTELQ SKIFVPYFST KYSGSGIGLA
LAKRLVEDMK GTIWFETTAD KGTSFYIEMP YYNE
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