| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2192 |
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| Symbol | ispG |
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| ID | 4183941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2545295 |
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| End bp | 2547292 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638072193 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_678797 |
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| Protein GI | 110638588 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0119355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAG GCGAACTTTC TTCAATAAAC ACAAAATACT GTTCCAGTCT TACCCAGTAT
GTGCGTAGGA AATCAAGTGT TGTTACCATA GGAAAAGTTC CGATGGGCGG CGACTATCCT
ATCCGGTTAC AATCGATGAC TACGGTTGAT ACGATGGACA CGATGGGCAG CGTGGAGCAA
ATAATCCGAA TGGTAGAGGC CGGATGTGAG TATGTCAGAG TGACAGCTCC AAGTGTAAAG
GAGGCTCAGA ATTTAGAAAA CATTAAGAAC GAATTATTAA AACGCGGGTA CGATGTTCCC
CTGGTTGCCG ATATACATTT TACTCCGAAT GCAGCCGAAC TTGCTGCAAA AATTGTTGAA
AAAGTCCGGA TTAACCCGGG CAATTATGCC GACAAAAAGA AGTTTGAAGT AATCGAATAT
ACAGACGCTT CCTATCAGGA AGAGCTCGAA CGTATACGTG AAAAGTTTAT TCCGCTGGTA
AAAATCTGTA AAGAATACGG TACGGCGATG CGGATCGGAA CCAACCACGG CTCTCTTTCA
GACCGGATTT TGTCCCGCTA CGGAGACACT CCTTTGGGTA TGGTGGAGTC TGCACTGGAG
TTTTTGCGCA TCTGTGAAGA CTTGGAATAT TACAATATTG TAATTTCCAT GAAAGCAAGT
AATACCCAGG TTATGGTGCA GGCATACCGC CTGCTGGTTC AGAAACTGGA GGAAGAAGGG
CTGCGTCCTT ACCCCTTGCA TCTGGGTGTA ACGGAAGCCG GAGAAGCTGA AGATGGAAGG
ATAAAATCTG CCGTTGGGAT CGGAACATTA TTGGAAGACG GGTTAGGAGA TACCGTTCGG
GTGTCCTTAA CCGAGGCTCC GGAATTTGAA ATTCCCGTTG CTCAAAAATT GGTTGACCGG
TATATCGACC GGAAAAAACA CGCTGCTATT CCCTTCGTAG AAAAAAATCC GATCAACCCG
TATTCTTATA AAAGGAGAAC GACTACAGAT GTACATACAA TCGGTGGCTT AAATGTGCCA
AGAGTGATCG CCGATTTCAG TGATGTTGAA TCACTCGAGG TTCAGGACCT GAAATCTATA
GGACATTTTT ATTTGCCTGC ATTGGATAAA TGGAGCATGA ATGATCTGGG TGCAGACTTT
ATCTATACGG GTAAAAACAA AGCACCTTTT ATGCTGCCGA ATGGCCTGAA GGAAATTGTA
GATGCAGATA CGTGGAAGGT GTTAACGGAC CAGACACATG TATTTCCGTT ATTTATGGCC
CGCTGGTATA AAACGGATGT GGTAAAACAC CCGCAGCTGA ACTTTGTTGT CGCTGATATT
GAAGATGTTG ACGACGCCTT GTTGCTGCGT TTGGCTTCTG ATACAACCGC TGTGCTGATC
CTGGAATCGT TCAATGAACA TGCCATGGCC GAGTTGAGAA GGAGTTTTAT CACGTTAATG
AACAGAGAGA TCGCTACACC CGTTATTATA AAACGTGCGT ATACACATAA GAATGAAGAA
ACGTTGTTTT TGGCAGCTTC AACCGATGCA GGTGGTTTAC TGGTAGATGG GCTGGGAGAT
GGTATTTTCC TGTCTTCAGA AAAAATGATT CTTGCGGAGA AAGAAGCGTT GTTGGCATAT
TTAAAATCGG TGAATAATCT GGGTTTCGGA ATTTTGCAGG CAGCACGTAC GCGTATGACC
AAAACGGAAT ACATTTCCTG TCCATCCTGC GGAAGAACTT TGTTTGACTT GCAGGAAACG
ACCGCGATGA TCCGTAAGCG CACTGATCAT TTAAAAGGCG TGAAGATCGG GATCATGGGC
TGCATTGTGA ATGGTCCGGG TGAAATGGCC GATGCCGATT ACGGATATGT GGGTGTTGGG
AAAGATAAGA TTGCGTTATA CCGCGGACAA ACGGTTGTGA ACAAGGCGGT ACATTCGGAT
AAGGCCGTAG ATGAGCTAAT CAATATTATT AAAGAAGATG GCAAATGGCT GGAACCAGTG
GTTTCGGAAG TTATATAA
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| Protein sequence | MSSGELSSIN TKYCSSLTQY VRRKSSVVTI GKVPMGGDYP IRLQSMTTVD TMDTMGSVEQ
IIRMVEAGCE YVRVTAPSVK EAQNLENIKN ELLKRGYDVP LVADIHFTPN AAELAAKIVE
KVRINPGNYA DKKKFEVIEY TDASYQEELE RIREKFIPLV KICKEYGTAM RIGTNHGSLS
DRILSRYGDT PLGMVESALE FLRICEDLEY YNIVISMKAS NTQVMVQAYR LLVQKLEEEG
LRPYPLHLGV TEAGEAEDGR IKSAVGIGTL LEDGLGDTVR VSLTEAPEFE IPVAQKLVDR
YIDRKKHAAI PFVEKNPINP YSYKRRTTTD VHTIGGLNVP RVIADFSDVE SLEVQDLKSI
GHFYLPALDK WSMNDLGADF IYTGKNKAPF MLPNGLKEIV DADTWKVLTD QTHVFPLFMA
RWYKTDVVKH PQLNFVVADI EDVDDALLLR LASDTTAVLI LESFNEHAMA ELRRSFITLM
NREIATPVII KRAYTHKNEE TLFLAASTDA GGLLVDGLGD GIFLSSEKMI LAEKEALLAY
LKSVNNLGFG ILQAARTRMT KTEYISCPSC GRTLFDLQET TAMIRKRTDH LKGVKIGIMG
CIVNGPGEMA DADYGYVGVG KDKIALYRGQ TVVNKAVHSD KAVDELINII KEDGKWLEPV
VSEVI
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