Gene CHU_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2165 
Symbol 
ID4184727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2521056 
End bp2522486 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content42% 
IMG OID638072165 
Productspore maturation-related protein 
Protein accessionYP_678770 
Protein GI110638561 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.797788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTAA GCAGGTTCTG GCTCGCGATA TTTATTTCTT CGTTATTATT TGTACTTGTA 
TCCTTATTCA CCGGTTCTTT TTATAGTCTG GAATATAGCT TAACGGGTAA GAAGGATGAC
CTGAAAATTA TTTCTGAAAA GTACCTTTCC GAACTTCCGG TTGCGCTTCA GGACAGCCTG
AAAGCAAGCC CGGCGCACAG CGTTGTGATC AACGATACCA GTTTTGTGTA CGAAAAATCG
GTTGTGAAAA TCTATCACGG CAAACAGCAG GCAGACGGGC TTTTAACCAC CTGTAAAAAT
ACCATTACAG ATATCATCAT TCCGCTGATC GCTTACCTGG CCTTCTTCTG CGGGCTGCTG
CAATTACTTA TCGATTCGGG TGCTTCTGAA AAACTAGCGG TGCTGATCAG TCCGGTTTTT
GTAAAGATCT TTCCTGAGAT CCCTAAAAAT CATCCGTCTA TATCCTACAT GACCCTGAAT
TTTGCGGCTA ACTTTCTTGG TCTGGATTCT GCAGCCACAC CCTTTGGATT AAAGGCTATG
GAAAGCTTAC AGGAGCTGAA CAAAAACAAA GAGGTAGCAA GTAATTCCCA GATCATGTTT
ATGTGCCTGC ATGCAGCCGG ACTTACCTTA ATACCAACAT CCATTATCGG TTACAGAGCG
GCGCAAAACG CCACCAATCC CGCCGATGTA ATGCTGCCGT GTATCATTAC ATCGTTTATC
GGTACCATTG CAGCGTTGCT GATTGTTGGT ATCCGTCAGA AAATAAATTT CAAAAGTGCT
TCGCTCATTC TTTCCATCGG TTTATTATCC GGCGTTATAA TTTCGCTGCT GTTATTTATT
AATACCCTGG ACCTGATTTC AAAAAATCAT TTTACAGCCA ACCTGTCTAA TGTACTCATG
TTTGGCATCA TCCTGTTTAT TCTGGTATAT GCTCTTGCAA AAGAAAAAGT ATTTGATGCG
CAAGGGAAAA ATGTATTTTC ATCCTTTGTA GAAGGAGCTA CATCCGGTGC CCGGACAGGC
TTTACGGTGT TTCCCTATGT ACTGGGAATG CTTGTAGCCA TTTCGTTGTT CCGCAACAGT
GGTTTGTTTG AAATTATTAC AACAAAACTG GCCAGTTTCT TCCTGCTGTT TGATCTCAAT
AAATCCATTG TAGATGCACT TCCCGTGGCC TTGCTGCGGC CTTTCAGCTC AGGTGGTTCG
AGAGGTTTTA TGATTGATGC CATGAATACG TATGGCCCCG ATTCCTTAAC CGGCCGTTTG
TCCTGTATCT TCCAGTGTGC TGCCGAAACA ACATTCTATG TGATCGCTGT TTATTTTGGA
AGCATAAACA TTAAAAACGT ACGTTACACA TTAACGACTA TGCTTTGGGT AGATTTTATC
TGCGTGCTGG CAGCCATCTT TGTAAGCGTG TTGTTTTTTG GGTTAAGTTA A
 
Protein sequence
MVLSRFWLAI FISSLLFVLV SLFTGSFYSL EYSLTGKKDD LKIISEKYLS ELPVALQDSL 
KASPAHSVVI NDTSFVYEKS VVKIYHGKQQ ADGLLTTCKN TITDIIIPLI AYLAFFCGLL
QLLIDSGASE KLAVLISPVF VKIFPEIPKN HPSISYMTLN FAANFLGLDS AATPFGLKAM
ESLQELNKNK EVASNSQIMF MCLHAAGLTL IPTSIIGYRA AQNATNPADV MLPCIITSFI
GTIAALLIVG IRQKINFKSA SLILSIGLLS GVIISLLLFI NTLDLISKNH FTANLSNVLM
FGIILFILVY ALAKEKVFDA QGKNVFSSFV EGATSGARTG FTVFPYVLGM LVAISLFRNS
GLFEIITTKL ASFFLLFDLN KSIVDALPVA LLRPFSSGGS RGFMIDAMNT YGPDSLTGRL
SCIFQCAAET TFYVIAVYFG SINIKNVRYT LTTMLWVDFI CVLAAIFVSV LFFGLS