Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2165 |
Symbol | |
ID | 4184727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2521056 |
End bp | 2522486 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072165 |
Product | spore maturation-related protein |
Protein accession | YP_678770 |
Protein GI | 110638561 |
COG category | [R] General function prediction only |
COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.797788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTAA GCAGGTTCTG GCTCGCGATA TTTATTTCTT CGTTATTATT TGTACTTGTA TCCTTATTCA CCGGTTCTTT TTATAGTCTG GAATATAGCT TAACGGGTAA GAAGGATGAC CTGAAAATTA TTTCTGAAAA GTACCTTTCC GAACTTCCGG TTGCGCTTCA GGACAGCCTG AAAGCAAGCC CGGCGCACAG CGTTGTGATC AACGATACCA GTTTTGTGTA CGAAAAATCG GTTGTGAAAA TCTATCACGG CAAACAGCAG GCAGACGGGC TTTTAACCAC CTGTAAAAAT ACCATTACAG ATATCATCAT TCCGCTGATC GCTTACCTGG CCTTCTTCTG CGGGCTGCTG CAATTACTTA TCGATTCGGG TGCTTCTGAA AAACTAGCGG TGCTGATCAG TCCGGTTTTT GTAAAGATCT TTCCTGAGAT CCCTAAAAAT CATCCGTCTA TATCCTACAT GACCCTGAAT TTTGCGGCTA ACTTTCTTGG TCTGGATTCT GCAGCCACAC CCTTTGGATT AAAGGCTATG GAAAGCTTAC AGGAGCTGAA CAAAAACAAA GAGGTAGCAA GTAATTCCCA GATCATGTTT ATGTGCCTGC ATGCAGCCGG ACTTACCTTA ATACCAACAT CCATTATCGG TTACAGAGCG GCGCAAAACG CCACCAATCC CGCCGATGTA ATGCTGCCGT GTATCATTAC ATCGTTTATC GGTACCATTG CAGCGTTGCT GATTGTTGGT ATCCGTCAGA AAATAAATTT CAAAAGTGCT TCGCTCATTC TTTCCATCGG TTTATTATCC GGCGTTATAA TTTCGCTGCT GTTATTTATT AATACCCTGG ACCTGATTTC AAAAAATCAT TTTACAGCCA ACCTGTCTAA TGTACTCATG TTTGGCATCA TCCTGTTTAT TCTGGTATAT GCTCTTGCAA AAGAAAAAGT ATTTGATGCG CAAGGGAAAA ATGTATTTTC ATCCTTTGTA GAAGGAGCTA CATCCGGTGC CCGGACAGGC TTTACGGTGT TTCCCTATGT ACTGGGAATG CTTGTAGCCA TTTCGTTGTT CCGCAACAGT GGTTTGTTTG AAATTATTAC AACAAAACTG GCCAGTTTCT TCCTGCTGTT TGATCTCAAT AAATCCATTG TAGATGCACT TCCCGTGGCC TTGCTGCGGC CTTTCAGCTC AGGTGGTTCG AGAGGTTTTA TGATTGATGC CATGAATACG TATGGCCCCG ATTCCTTAAC CGGCCGTTTG TCCTGTATCT TCCAGTGTGC TGCCGAAACA ACATTCTATG TGATCGCTGT TTATTTTGGA AGCATAAACA TTAAAAACGT ACGTTACACA TTAACGACTA TGCTTTGGGT AGATTTTATC TGCGTGCTGG CAGCCATCTT TGTAAGCGTG TTGTTTTTTG GGTTAAGTTA A
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Protein sequence | MVLSRFWLAI FISSLLFVLV SLFTGSFYSL EYSLTGKKDD LKIISEKYLS ELPVALQDSL KASPAHSVVI NDTSFVYEKS VVKIYHGKQQ ADGLLTTCKN TITDIIIPLI AYLAFFCGLL QLLIDSGASE KLAVLISPVF VKIFPEIPKN HPSISYMTLN FAANFLGLDS AATPFGLKAM ESLQELNKNK EVASNSQIMF MCLHAAGLTL IPTSIIGYRA AQNATNPADV MLPCIITSFI GTIAALLIVG IRQKINFKSA SLILSIGLLS GVIISLLLFI NTLDLISKNH FTANLSNVLM FGIILFILVY ALAKEKVFDA QGKNVFSSFV EGATSGARTG FTVFPYVLGM LVAISLFRNS GLFEIITTKL ASFFLLFDLN KSIVDALPVA LLRPFSSGGS RGFMIDAMNT YGPDSLTGRL SCIFQCAAET TFYVIAVYFG SINIKNVRYT LTTMLWVDFI CVLAAIFVSV LFFGLS
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