Gene CHU_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2115 
SymbolfabG 
ID4186321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2461740 
End bp2462948 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content45% 
IMG OID638072115 
Product3-oxoacyl-[acyl-carrier protein] synthase 
Protein accessionYP_678720 
Protein GI110638511 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAC GTGTTTTAAT TTCCGGCATT GGTTCTGTTT CTTCAATTGG TCTCAATGTA 
ACGGAGTTAA CGGATTCTAT TCTTGAATCA AAAACAGGTG TTTCCAGAAA AACCAGATTG
GATTCTATTC TGGCGCGTGC CTTACCAACA GCACAGATAC AGCTAAGTGA TGCCGCATTA
AAAAGCAGGG TGCCGGGTTT ACCGGCTAAG CAGGTATATT CCAGAACAGC TTTATTAGGT
ATGATCGCCG CTTCGGAAGC CGTAGCAATG GCAGGCTTAA CAAAGGAAGA CTGTATACGT
GCAGGCCTGG TTAATTCAAC CAGTGCCGGT GGTATGGATA AAGGCGAATT TTTTTACGCA
GATTTTATTC AATCTCCTTC CAAAGGAAAT CTTAAATTAG CATTAACCCA CGACTGTGGT
GACGCCGCCG AACAAATGGC AGCCTTGCTG GGGATTGAAC AATACATTAC AACCATCAGT
ACAGCGTGTT CATCTGCAGC CAATGCAATG ATTCATGCAG CACGCCTGAT TAAAGCAGGC
GTATGCGATA TAGTTGTGGC AGGCGGTTCA GATGCCATCT GTAAATTTAC CATAAACGGT
TTTAATTCGC TGATGATCTT ATCCGAAGAG CCTTGCAAAC CCTTTGATAA AAACCGTACG
GGTTTGAATT TAGGTGAAGC CGCCGGATAT TTCGTACTTG AATCAGAAGC TTCGGTAACC
CGCAGAGGTG TAAAACCATT AGCCGTATTA TCCGGTTATG GCAATGCCTG TGATGCGTAT
CATCAGACGG CATCTTCGCC CAATGGAGAA GGCGCTTACC TGGCCATGAT GCAGGCCATC
AACGTGAGCG GTTATGCACC ATCCGTGATC GATTACATCA ATGCACACGG AACAGGTACA
CAGAATAATG ACATGTCGGA GAGTGTTGCC TTGCAGCGGA TCTTCCCGGC AGATCTTCCG
CCGGTGAGTT CAACCAAAGC CATGACCGGC CATACCTTAG CAGCTGCAGG TGGGATAGAA
GCAGTCATGT CTGTGCTGGC GATACAGAAC GGATGGATGT TCCCGAATAA AAATTTCAAA
GACCCCATTG AAGAGACAGG TATTATACCG GTTACAGAAC TTCAGACAAA TAAAACGATT
AAACATATTC TCTCTAATTC CTTTGGTTTT GGGGGCAACA ACTCATCTTT ACTGATCTCG
GCATGTTAA
 
Protein sequence
MSSRVLISGI GSVSSIGLNV TELTDSILES KTGVSRKTRL DSILARALPT AQIQLSDAAL 
KSRVPGLPAK QVYSRTALLG MIAASEAVAM AGLTKEDCIR AGLVNSTSAG GMDKGEFFYA
DFIQSPSKGN LKLALTHDCG DAAEQMAALL GIEQYITTIS TACSSAANAM IHAARLIKAG
VCDIVVAGGS DAICKFTING FNSLMILSEE PCKPFDKNRT GLNLGEAAGY FVLESEASVT
RRGVKPLAVL SGYGNACDAY HQTASSPNGE GAYLAMMQAI NVSGYAPSVI DYINAHGTGT
QNNDMSESVA LQRIFPADLP PVSSTKAMTG HTLAAAGGIE AVMSVLAIQN GWMFPNKNFK
DPIEETGIIP VTELQTNKTI KHILSNSFGF GGNNSSLLIS AC