Gene CHU_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2096 
Symbol 
ID4186302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2442427 
End bp2443233 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content42% 
IMG OID638072096 
Productpirin-related protein 
Protein accessionYP_678701 
Protein GI110638492 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.295198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAACG TTATGCAGAA CAATATCGAT GAACTCAAGG AACTTGAAAT TTTAGGATTC 
AATCATATTC CCAATACTCA ATCAACACAT ATGGAAAATG CTGTACTGCA TAAAGCTGAA
ACACGCGGAG ACGCGAATCA TGGGTGGCTG CACAGCAAAC ATACATTCAG TTTTGCAAAT
TATTACAATC CCGAACGCAT GCACTTCGGA GTGCTGCGTG TATTAAATGA TGATGTTGTT
TCCGGTGGAA AAGGTTTTGG AACACATCCG CATGACAACA TGGAAATCAT CAGCATTCCG
CTGGAAGGAG ATCTGGAGCA TAAGGACAGT ATGGGTAATG TTACGGTTAT CCGTAATGGA
GATGTACAGG TAATGTCTGC CGGCACCGGC ATTCAACACA GCGAGTATAA TAAGAATGCC
GATAAGCAGG TGAAGTTTTT ACAGATCTGG GTGTTTCCGG ATAAAAAAAA TGTGACGCCT
CGGTACGACC AGATTACCTT ACAACGGGCC CACCGGCATA ATACATTTCA GCAGATACTT
TCACCAGACC CGGAAGATGC CGGCGTATGG ATTCATCAGC ATGCCTGGTT TCATTTAGCC
CAATTTGATG CCAATCATAC ACAGGTTTAT AAAATGAAAG ATAAAGTAAA CGGGTTGTAT
GTATTCAATC TGAATGGCAG CATTACTGTG AATAACCAGA TATTAAACGC ACGGGATGGT
TATGGTATCT GGAACGTAGA ACAGGTAAGT ATTAAAGCGG ATTCCGCATC AGAGTTTCTG
TTGATGGAAG TGCCAATGAC AGTTTGA
 
Protein sequence
MGNVMQNNID ELKELEILGF NHIPNTQSTH MENAVLHKAE TRGDANHGWL HSKHTFSFAN 
YYNPERMHFG VLRVLNDDVV SGGKGFGTHP HDNMEIISIP LEGDLEHKDS MGNVTVIRNG
DVQVMSAGTG IQHSEYNKNA DKQVKFLQIW VFPDKKNVTP RYDQITLQRA HRHNTFQQIL
SPDPEDAGVW IHQHAWFHLA QFDANHTQVY KMKDKVNGLY VFNLNGSITV NNQILNARDG
YGIWNVEQVS IKADSASEFL LMEVPMTV