Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2096 |
Symbol | |
ID | 4186302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2442427 |
End bp | 2443233 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072096 |
Product | pirin-related protein |
Protein accession | YP_678701 |
Protein GI | 110638492 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.295198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAACG TTATGCAGAA CAATATCGAT GAACTCAAGG AACTTGAAAT TTTAGGATTC AATCATATTC CCAATACTCA ATCAACACAT ATGGAAAATG CTGTACTGCA TAAAGCTGAA ACACGCGGAG ACGCGAATCA TGGGTGGCTG CACAGCAAAC ATACATTCAG TTTTGCAAAT TATTACAATC CCGAACGCAT GCACTTCGGA GTGCTGCGTG TATTAAATGA TGATGTTGTT TCCGGTGGAA AAGGTTTTGG AACACATCCG CATGACAACA TGGAAATCAT CAGCATTCCG CTGGAAGGAG ATCTGGAGCA TAAGGACAGT ATGGGTAATG TTACGGTTAT CCGTAATGGA GATGTACAGG TAATGTCTGC CGGCACCGGC ATTCAACACA GCGAGTATAA TAAGAATGCC GATAAGCAGG TGAAGTTTTT ACAGATCTGG GTGTTTCCGG ATAAAAAAAA TGTGACGCCT CGGTACGACC AGATTACCTT ACAACGGGCC CACCGGCATA ATACATTTCA GCAGATACTT TCACCAGACC CGGAAGATGC CGGCGTATGG ATTCATCAGC ATGCCTGGTT TCATTTAGCC CAATTTGATG CCAATCATAC ACAGGTTTAT AAAATGAAAG ATAAAGTAAA CGGGTTGTAT GTATTCAATC TGAATGGCAG CATTACTGTG AATAACCAGA TATTAAACGC ACGGGATGGT TATGGTATCT GGAACGTAGA ACAGGTAAGT ATTAAAGCGG ATTCCGCATC AGAGTTTCTG TTGATGGAAG TGCCAATGAC AGTTTGA
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Protein sequence | MGNVMQNNID ELKELEILGF NHIPNTQSTH MENAVLHKAE TRGDANHGWL HSKHTFSFAN YYNPERMHFG VLRVLNDDVV SGGKGFGTHP HDNMEIISIP LEGDLEHKDS MGNVTVIRNG DVQVMSAGTG IQHSEYNKNA DKQVKFLQIW VFPDKKNVTP RYDQITLQRA HRHNTFQQIL SPDPEDAGVW IHQHAWFHLA QFDANHTQVY KMKDKVNGLY VFNLNGSITV NNQILNARDG YGIWNVEQVS IKADSASEFL LMEVPMTV
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