Gene CHU_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2048 
Symbol 
ID4186709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2394311 
End bp2395897 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content36% 
IMG OID638072048 
Productglycoprotein 
Protein accessionYP_678653 
Protein GI110638444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAC TATTGACATC ATTTTTTTTC CTTGCTATTC GCGTTGCTTT TAGTCAATTA 
CTAACATTGC AGGATGATCA CCTGCGTGAT AAATTAATTT TATCCTATCC TCAGGTAATG
CAGGGTAACG CACTGGATAT CTCTAAAGCT TCTTTACTTA CAAATGTATT AGACTTACGC
GGCGCGGGTA TCACTAATGC AGCCGGCATA GAATATTTTA AAAGCATAAC TACGCTGGAC
TTAAGCAACA ATCAACTTAC CAGTGTACCG AATATTTCAG GCATAACCGG ACTCGTTAAT
TTTTATGCGT CAAACAACAA ATTAACTTCA TTGCCGAATA TGGCAACTTT ACACTTGAAA
GATTTTCAAG TAGTGAATAA TATGCTTACA GCACTTCCTG ATTTATCCGG TTCTACAGGT
TTACTATCTC TGTATTGCAG CAACAATAAT CTTATAGAGT TCCCTCCGCT TACACAATTT
CCACAACTCA GCAAATTAGT TTCAGGACAA AATCCAATCA GTGCTTCTTT TATTGATGTA
ACGCCCTGTA TACACCTTAC CGAACTGCAT GTACACAAGA CAGGTATTGA TACGATTATT
GGACTTGAAA AATTGACAGG TCTTACAACA TTGTATGCCT GGACGAATAA CATAAAAAGT
TTCAAGTCCC TGGATCTGAT AAGCACACTT ACAATCTGCA TTATTTATGA CAATCCGTTT
TCAGACATGC CATACCTGCA AAACAAATCC GCACTCAACA GACTAAACGT AAATGGTGCC
TTACTTACGT TTGAAGACAT AAAACCTGTA CTTCAAAATC CTCCGGCAAC ATTTATTTAC
TCTCCTCAAC GGGAAATTTT CTTTGCTGAT GTTACAGCAC GGGCTGAAAA TAATTATACA
CTAACCTATC CTGTAACCGC ACCGCTTTCA TCAAATATAT ATGTATGGTT TAAAAATGGC
ATCGTAATCG ATAGCTCTGC ATCGCCATCA TACACATTTA GTCCGTTAAA AAATGCAGAT
GCGGGTAACT ATCAATTGAA AATATACAAT ACATCTGTTT CATTATTAAC ATTAAATACC
AATACGTTTA AGATTACTGT ACAACCTTGT ATTGAACTTA ATATCATCAA TGCTGATGTT
GTAAGTAAGG ATTGCAGTAA AGGTTATACC ATTGACTTTT CACAAAATCA AATCTCTGGC
GGTACTCCTC CGTTTACCTA CGAACTCGCA ACAAGTTCAA CACGGAAAAA CATTAGCTAT
CCCCTCGTTG AAAATGTTGA AGCCGGAAAC TATTTTCTTA AAGTAGTAGA TTCCAGACTA
TGTAGTGCAA CAAACAATTT CGTTTTAAAT AAAATTGATA ACTGCGACCC TGTAATGACT
CCAAACGGAG ATGGCATTAC CGATACATAT TATATTGAAA AAACCGGAAA AGTAACTGTA
TACAATCTTC AAAGAGTTGT AGTAAATACC TTACAAGCAC CTATTGTCTG GGATGGAACT
GATCGCAATG GTGCTTTACT TGATGCCGGA TTTTATATTC TGATTATGGA TGGCGAAAAG
CCTGTTTATT TAACTATAAT CAGATAG
 
Protein sequence
MRILLTSFFF LAIRVAFSQL LTLQDDHLRD KLILSYPQVM QGNALDISKA SLLTNVLDLR 
GAGITNAAGI EYFKSITTLD LSNNQLTSVP NISGITGLVN FYASNNKLTS LPNMATLHLK
DFQVVNNMLT ALPDLSGSTG LLSLYCSNNN LIEFPPLTQF PQLSKLVSGQ NPISASFIDV
TPCIHLTELH VHKTGIDTII GLEKLTGLTT LYAWTNNIKS FKSLDLISTL TICIIYDNPF
SDMPYLQNKS ALNRLNVNGA LLTFEDIKPV LQNPPATFIY SPQREIFFAD VTARAENNYT
LTYPVTAPLS SNIYVWFKNG IVIDSSASPS YTFSPLKNAD AGNYQLKIYN TSVSLLTLNT
NTFKITVQPC IELNIINADV VSKDCSKGYT IDFSQNQISG GTPPFTYELA TSSTRKNISY
PLVENVEAGN YFLKVVDSRL CSATNNFVLN KIDNCDPVMT PNGDGITDTY YIEKTGKVTV
YNLQRVVVNT LQAPIVWDGT DRNGALLDAG FYILIMDGEK PVYLTIIR