Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2048 |
Symbol | |
ID | 4186709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2394311 |
End bp | 2395897 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638072048 |
Product | glycoprotein |
Protein accession | YP_678653 |
Protein GI | 110638444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAC TATTGACATC ATTTTTTTTC CTTGCTATTC GCGTTGCTTT TAGTCAATTA CTAACATTGC AGGATGATCA CCTGCGTGAT AAATTAATTT TATCCTATCC TCAGGTAATG CAGGGTAACG CACTGGATAT CTCTAAAGCT TCTTTACTTA CAAATGTATT AGACTTACGC GGCGCGGGTA TCACTAATGC AGCCGGCATA GAATATTTTA AAAGCATAAC TACGCTGGAC TTAAGCAACA ATCAACTTAC CAGTGTACCG AATATTTCAG GCATAACCGG ACTCGTTAAT TTTTATGCGT CAAACAACAA ATTAACTTCA TTGCCGAATA TGGCAACTTT ACACTTGAAA GATTTTCAAG TAGTGAATAA TATGCTTACA GCACTTCCTG ATTTATCCGG TTCTACAGGT TTACTATCTC TGTATTGCAG CAACAATAAT CTTATAGAGT TCCCTCCGCT TACACAATTT CCACAACTCA GCAAATTAGT TTCAGGACAA AATCCAATCA GTGCTTCTTT TATTGATGTA ACGCCCTGTA TACACCTTAC CGAACTGCAT GTACACAAGA CAGGTATTGA TACGATTATT GGACTTGAAA AATTGACAGG TCTTACAACA TTGTATGCCT GGACGAATAA CATAAAAAGT TTCAAGTCCC TGGATCTGAT AAGCACACTT ACAATCTGCA TTATTTATGA CAATCCGTTT TCAGACATGC CATACCTGCA AAACAAATCC GCACTCAACA GACTAAACGT AAATGGTGCC TTACTTACGT TTGAAGACAT AAAACCTGTA CTTCAAAATC CTCCGGCAAC ATTTATTTAC TCTCCTCAAC GGGAAATTTT CTTTGCTGAT GTTACAGCAC GGGCTGAAAA TAATTATACA CTAACCTATC CTGTAACCGC ACCGCTTTCA TCAAATATAT ATGTATGGTT TAAAAATGGC ATCGTAATCG ATAGCTCTGC ATCGCCATCA TACACATTTA GTCCGTTAAA AAATGCAGAT GCGGGTAACT ATCAATTGAA AATATACAAT ACATCTGTTT CATTATTAAC ATTAAATACC AATACGTTTA AGATTACTGT ACAACCTTGT ATTGAACTTA ATATCATCAA TGCTGATGTT GTAAGTAAGG ATTGCAGTAA AGGTTATACC ATTGACTTTT CACAAAATCA AATCTCTGGC GGTACTCCTC CGTTTACCTA CGAACTCGCA ACAAGTTCAA CACGGAAAAA CATTAGCTAT CCCCTCGTTG AAAATGTTGA AGCCGGAAAC TATTTTCTTA AAGTAGTAGA TTCCAGACTA TGTAGTGCAA CAAACAATTT CGTTTTAAAT AAAATTGATA ACTGCGACCC TGTAATGACT CCAAACGGAG ATGGCATTAC CGATACATAT TATATTGAAA AAACCGGAAA AGTAACTGTA TACAATCTTC AAAGAGTTGT AGTAAATACC TTACAAGCAC CTATTGTCTG GGATGGAACT GATCGCAATG GTGCTTTACT TGATGCCGGA TTTTATATTC TGATTATGGA TGGCGAAAAG CCTGTTTATT TAACTATAAT CAGATAG
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Protein sequence | MRILLTSFFF LAIRVAFSQL LTLQDDHLRD KLILSYPQVM QGNALDISKA SLLTNVLDLR GAGITNAAGI EYFKSITTLD LSNNQLTSVP NISGITGLVN FYASNNKLTS LPNMATLHLK DFQVVNNMLT ALPDLSGSTG LLSLYCSNNN LIEFPPLTQF PQLSKLVSGQ NPISASFIDV TPCIHLTELH VHKTGIDTII GLEKLTGLTT LYAWTNNIKS FKSLDLISTL TICIIYDNPF SDMPYLQNKS ALNRLNVNGA LLTFEDIKPV LQNPPATFIY SPQREIFFAD VTARAENNYT LTYPVTAPLS SNIYVWFKNG IVIDSSASPS YTFSPLKNAD AGNYQLKIYN TSVSLLTLNT NTFKITVQPC IELNIINADV VSKDCSKGYT IDFSQNQISG GTPPFTYELA TSSTRKNISY PLVENVEAGN YFLKVVDSRL CSATNNFVLN KIDNCDPVMT PNGDGITDTY YIEKTGKVTV YNLQRVVVNT LQAPIVWDGT DRNGALLDAG FYILIMDGEK PVYLTIIR
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