Gene CHU_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2020 
Symbol 
ID4184545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2353486 
End bp2354520 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content37% 
IMG OID638072023 
Producthypothetical protein 
Protein accessionYP_678628 
Protein GI110638419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATAAAT TCACCTTAAT ATTCAATCCT TATATTATGC TCCGAATATA TCTATTGTGT 
TTTTTTATCA GTATTCTTCA AATAAATAGT TTTGCTCAGA CCATTGGGGG AAAAGTGCTT
TCCCAGCAAT GGAAAAAGAT TGAATATGGC TATAATCCGG ATAGTATACA GATAGATAAC
ATTTATTATA TCCATGGCGA TGGGATGTTT ATGTGTACCA ACAAAGGCCT TTATTATTAT
ATTGATTCCA TATACCGGTT TAAAAAGATA AATGTCTCCC CAAATCTTGC CAATGCCCGT
GTAAGCATCA TTATGAAACA TGTTGATTAC TATTACACAG GTTTCAGAGA TGGTTACGGT
CTGTATAGAA GCCACGATTT AAAAAAATGG GAACCATTGG GTAGCGGAAA GCTGGGCACA
AGTAAGATCT TCTATTTATA CAGCATGGAT TCAATGTTAT TCGTATGCAA CTGGCAAAAA
ACCATTTACC TGTCTCATAA TCTTGGAAAA ACATTCAGAG GTATCAGCGT AGGGTTTAAT
TCGCTGGGCA AAAGCTATAT TAATAACATC GAAAACTCGG AAGAGTATAT GTTCTGCAGC
ATGAATGGCG ATGGTGTATA TTCGTTGAAT ATTAAAAAAG GAACTGCCTG GGAACACAGC
GATAAAGGAT TACCTGAAAG CAAAAACATC GGTGAAATAG CAGATATAGG TAAAACATTG
TTTCTGGCGA CAGATAATGG TGTATACCGG TCAGATAACA AGGCATCTTC CTGGAAACCC
TATAACACAG GCATTTCTGG CAAACTCATT ACCCGTTTGG TAGCCGAAGG TGGTATTCTG
TATGCTGCTA CAAACAAGGG AGAATTATTT TATTCGGAAG ATTTAGCTGT AACCTGGAAA
AAAATCCCGA TTGATTTTAT GCAATCGCCT ATCAGTGGTG TGTGTGTAAC CGATAAGGCC
GTATTTGTAG CGGTAAACGG TTTAGATGCA AAACCTTCTT ATGTTTACTA CTTACCATTC
CTTCTTAAAA AGTAA
 
Protein sequence
MYKFTLIFNP YIMLRIYLLC FFISILQINS FAQTIGGKVL SQQWKKIEYG YNPDSIQIDN 
IYYIHGDGMF MCTNKGLYYY IDSIYRFKKI NVSPNLANAR VSIIMKHVDY YYTGFRDGYG
LYRSHDLKKW EPLGSGKLGT SKIFYLYSMD SMLFVCNWQK TIYLSHNLGK TFRGISVGFN
SLGKSYINNI ENSEEYMFCS MNGDGVYSLN IKKGTAWEHS DKGLPESKNI GEIADIGKTL
FLATDNGVYR SDNKASSWKP YNTGISGKLI TRLVAEGGIL YAATNKGELF YSEDLAVTWK
KIPIDFMQSP ISGVCVTDKA VFVAVNGLDA KPSYVYYLPF LLKK