Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2016 |
Symbol | |
ID | 4184541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2350270 |
End bp | 2350797 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072019 |
Product | hypothetical protein |
Protein accession | YP_678624 |
Protein GI | 110638415 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA TTAACACAGG CGGCGGCGGC GGTAAGGATG GTAAAAAAAG ATCCAAAAAA ATGTCTACGA AAGTAGATAT GACACCGATG GTGGATTTGG CTTTCCTTTT AATTACTTTC TTCATGTTGG CTACCACTTT AACAAAGCAA CAGAAATTTG ATTTCGGGGT TCCTCCGGAT GTAACAAATC CGGAAGATCA ACCGGAATTG AAAGCCAGTA ATGCAATCAC ACTGATCTTA GGAAAAGATG ATGCTATATA CTGGTATACA ATGAATCAGG ATGGCAGCAC TGATTTTCAC GAAACAGATT TCTCTGATGA CGGAATCCGT GCAACACTGA TCGAACGTAA GAAAGCCGTT GGTGCAGACT TAAACGTTGT GATCAAACCG ATGAAAGATT CGAAATACAA AAATTTAATT GATATTATTG ATGAGTTAGC CATACTGGGT ATTGGTAAAA AAGCTTTGGT TGAAGCAACT CCCGATGATA TTAAATTGGT TCAGGCAGAA AACGCTTCAG TAAATTAA
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Protein sequence | MAEINTGGGG GKDGKKRSKK MSTKVDMTPM VDLAFLLITF FMLATTLTKQ QKFDFGVPPD VTNPEDQPEL KASNAITLIL GKDDAIYWYT MNQDGSTDFH ETDFSDDGIR ATLIERKKAV GADLNVVIKP MKDSKYKNLI DIIDELAILG IGKKALVEAT PDDIKLVQAE NASVN
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