| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1966 |
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| Symbol | nrtD |
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| ID | 4186989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2295902 |
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| End bp | 2296756 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071969 |
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| Product | ABC type nitrate transporter, ATP-binding protein |
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| Protein accession | YP_678574 |
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| Protein GI | 110638365 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.7754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.21711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAAT CTATACATAT ACACCTACCC ATAAAGCCCG TGACAGCAGT ACCTGAAATA
AATACACATG TTGAACCCAT TAATCCTGCA GATGTAATGC TGGATATTCA ACACCTGAAA
AAAGTATATC CCACACCTAA AGGAGATTTT ACCGTATTGC AGGATTTTAA TCTTCAGGTT
AAGAAAGAAG AATTTATTTC CATCATTGGT CATTCCGGCT GTGGAAAGTC TACCATTCTT
TCTATGATTG CTGGTTTAAA TGAACTTACA GAAGGCAACA TTATTCTGAA TGGCAGAAAG
ATCACCGAAG CGGGGCCGGA TAGAGGAGTG ATCTTTCAAT CACCAAGTCT GATGCCGTGG
ATGACTGCTT TAGAAAATGT TATGTTAGGT GTGAACCAGG TTTTTTCGCA TATCTCAAAA
AGCGAAAGAA CAGATATTGC AAAATATTAT TTAGCGAAAG TCGGTTTGGA AGATTCGTTT
AATAAAAAAG CCAGTGAGCT TTCACAAGGT ATGAAGCAGC GTGTGGGTAT TGCCCGTGCA
TTTGCTTTAA AACCAAAGAT GCTGTTGCTG GATGAACCCT TTGGTATGCT CGATTCGTTA
ACAAGAGGGG AGCTGCAGGA TGTACTTGTA GATGTATGGA CGAAAGAAAA GATTACGGCA
ATCATGATTA CACACGACGT AGATGAGGCT ATTCTGTTAT CCGATAGGGT GGTGATGATG
ACCAGCGGAC CCTTCGCAAA AGTAGGAGAT ATAATGGGCG TGGGAATGGA ACGGCCACGG
AATAGAAGAA CACTGATCGA ACATCCGGAA TTTTATGATT ACAGAGCTTA TTTGATCGAT
TTTTTAGAAC ATTAA
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| Protein sequence | MTESIHIHLP IKPVTAVPEI NTHVEPINPA DVMLDIQHLK KVYPTPKGDF TVLQDFNLQV
KKEEFISIIG HSGCGKSTIL SMIAGLNELT EGNIILNGRK ITEAGPDRGV IFQSPSLMPW
MTALENVMLG VNQVFSHISK SERTDIAKYY LAKVGLEDSF NKKASELSQG MKQRVGIARA
FALKPKMLLL DEPFGMLDSL TRGELQDVLV DVWTKEKITA IMITHDVDEA ILLSDRVVMM
TSGPFAKVGD IMGVGMERPR NRRTLIEHPE FYDYRAYLID FLEH
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