Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1925 |
Symbol | |
ID | 4184274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2255841 |
End bp | 2256599 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071927 |
Product | transcriptional regulator |
Protein accession | YP_678533 |
Protein GI | 110638324 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.291819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACCT CTACATTCAA CTATTCATAT GTACTACCTG AACCAGCGCT GGCAGATTTT GTAGAGTCTT TTTGGGTTTT AGAAAATCAT TCGGATGAAG CCAAAGAAAT TGTTGTATTG CCCGACGGAA GCTTCGATGT ATTCTTTGGC TATTCGGTAA CAGAACCTTT TCACGTTACA TTGTCCGGTA TTGCTACAGA ATCTACTCAA GCCATACTTG CTGCACAAAC AGTAATGTTT GCAATCAGTT TTAAATTTTT AGCATTGGAA TATATCCTGC ACACACCGCT TGCCGGTTTA CTCAATTCAA CAGATTATTT ACCTAATGAT TTTTTAGACA TTCAACAAGC AGACCTGAGT GATCTGGAAT CGTTCAAAGA AAAAATTTCG TTGAAATTAA AAACGTGTTT ACAAAAAAAC ATTGATCCCA GAAAGACAAA ACTGTCTAAG TGTATCTATG ATTCCAAAGG TACGGTTACC ATACACCATG CTGCTGATAG CTGTGGCTGG AGCAGCAGGC AGATCAACCG GTATTTTCAG CACTGGGTCG GAATTTCACT GAAAAACTAT TTAACTATCT TACGGTTCCG TGCATCTTTT TCACAGATCC AAGCAGGCAA ACTTTTTCCG GAACAGCAGT ATACCGATCA GGCACATTTT ATCCGCGAAG TAAAGAAATT TGCCGGTGTT GTTCCCAAAG AATTGAGCCG GAATAAAAAT GACCGATTTA TACAATTTTC CATTCTGAAG AAGAAGTAG
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Protein sequence | MSTSTFNYSY VLPEPALADF VESFWVLENH SDEAKEIVVL PDGSFDVFFG YSVTEPFHVT LSGIATESTQ AILAAQTVMF AISFKFLALE YILHTPLAGL LNSTDYLPND FLDIQQADLS DLESFKEKIS LKLKTCLQKN IDPRKTKLSK CIYDSKGTVT IHHAADSCGW SSRQINRYFQ HWVGISLKNY LTILRFRASF SQIQAGKLFP EQQYTDQAHF IREVKKFAGV VPKELSRNKN DRFIQFSILK KK
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