Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1807 |
Symbol | |
ID | 4185033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2121099 |
End bp | 2122604 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638071806 |
Product | hypothetical protein |
Protein accession | YP_678416 |
Protein GI | 110638207 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0302066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.584755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGGACTT GTTCTAAATA TTTTAATCTT AAAAGGGTGT ATTCATGGAT ACACCCTTTT TTGTTATGCT TCATTTTCTG CATTCCCTCC CACGCTACCT ATTACTTTAC AACCGAATTA GAAGCAGCGT ACAAAGAAAT TGTTCAGCTT AAATTTACTG AAGCAACCAA ACGTATTACC GCAGAACAAC AGCGCGATCC GCACAATGGT TTACCCGTAT ATTTACGATC ACTGGCAGAA ACTACACAGT TGCTTTTTTC TGAAGATGAA CAGCAATACC AGATTTTAAA ATCTTCTGAA TCTGCCTACT TAAAACTACT CAACGCAAAC AACCTTACAA CCTCTCCGTA TCATAACTTC TGCCTGGCAG AAGTTAAACT TCAATGGGCT TTTGTAAAAA TGAAATTTAA CGACGAAGTG AATGGCGCGT TAAATACAAA ACAGGCATTG GGATTGTTAA ATGAAAATCT TAAAACCCAC CCTGCTTTTG TACCTACAAA AAAATCACTG GGCTTATTAA ATGTTATTAT CGGTTCAGTA CCCAATTCTC ATGCCTGGAT CGCTTCATCC CTTGGTTTTA AAGGGAATAT AGAAGCAGGA ATGAATATGC TTCAAGAAGT GATCGACAGC AAAAATATTT ATTTACAGGA AGCACTCTTA TTTAAAATTA TTGCCGAGCA ATATATTTTA AACAGAGATT CTAAAATGGA ATCTATTAAA CTGTTGTATG CTAAAAACCC TAACAACATT TTATATGGGT ATCTGTATGC CGCTATTTTA TGCAAGCATT CCAAATCAGA AGAAGCACTG ACGGTTATAG AGCGGCTGCC CGAAAATGCG TATGAAAGCC TTGCCGTTAT TGATTATTTA CATGGGGATG TGTTGCTGCA GCATGGAAAC TATGTTGAAT CACGTATATA CTTTAACCGA TTCCTCTCTG AGTTTAAAGG TAAAAATCTG ACCAAAGACG CTACGTATAA ATTATTTTTA TCGTACTGGC TGATGAATGC GGATGCAGAT GCAAATACCT ATTGGCAAAA GATCACAAGC GTTGGACAAA CAACCTATGA GTCGGATAAG TATGCGCACA AGATTGCACA GGCCAATGAA CTTCCGAATA AACAACTGGC AAAAATTCGT TTGTATACAG ACGGCGGACT ATATGAAAAA GGTCTTGAAG TATTTAATGA AACAAACCTG AGCGACCTGC TTACTAAAAA GGACAAAATC GAATATTACT ACCGAGCAGC GCGCCTGTTT CAAAAGTCAG GCAAAACAAA AGAATGCATG GAGTATTATG TAAAAGTAAT TACGCTGTCT ACCGATACTA AAAACAATTA TTATTTTGCA CCAAACTCAG CCTTGCAACT GGGCTATATC TATGTTCAGC TAAAGAATAC GCCTCAGGCT AAATACTATT TTAATCTTGC GATTGCGTAT AAAAATCACG AATATGAAAA TAGTATTGAA CAAAAAGCAA AAATTGCCCT GCACGAAATA AAATGA
|
Protein sequence | MRTCSKYFNL KRVYSWIHPF LLCFIFCIPS HATYYFTTEL EAAYKEIVQL KFTEATKRIT AEQQRDPHNG LPVYLRSLAE TTQLLFSEDE QQYQILKSSE SAYLKLLNAN NLTTSPYHNF CLAEVKLQWA FVKMKFNDEV NGALNTKQAL GLLNENLKTH PAFVPTKKSL GLLNVIIGSV PNSHAWIASS LGFKGNIEAG MNMLQEVIDS KNIYLQEALL FKIIAEQYIL NRDSKMESIK LLYAKNPNNI LYGYLYAAIL CKHSKSEEAL TVIERLPENA YESLAVIDYL HGDVLLQHGN YVESRIYFNR FLSEFKGKNL TKDATYKLFL SYWLMNADAD ANTYWQKITS VGQTTYESDK YAHKIAQANE LPNKQLAKIR LYTDGGLYEK GLEVFNETNL SDLLTKKDKI EYYYRAARLF QKSGKTKECM EYYVKVITLS TDTKNNYYFA PNSALQLGYI YVQLKNTPQA KYYFNLAIAY KNHEYENSIE QKAKIALHEI K
|
| |