Gene CHU_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1798 
Symbol 
ID4184694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2109877 
End bp2112126 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content41% 
IMG OID638071797 
Producthypothetical protein 
Protein accessionYP_678407 
Protein GI110638198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.545169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCGT CTTTTATTTG TAAAAGACGG ATTATATACG CACACATGAG ATTTTACAGG 
CAATACATAC AACACTTTTT TGTATGCTTA CTGATTTTAA CAGTAAGCAT ACGTACGTAT
GCGGCAGGAA TAACTGTATC TGTTGTGGTT AATGGTAACA CGGTTATTCC TGGTCCGTCT
AAAACAGTGT TTGTTTGTAA AGGCGGTATC TATAATCTTA AATCATCAAA CATTGCGACT
CCTCCTCCAG CTGGCTTACC AATATATGAA TGGAAAAATT TAGATTCAAC CGGAGCAACG
TTAACAGGTA ATCAGATCAA CACCTTCAAT GCAGGCAGAT GGGTTTCTAC CATTAAGTAT
TACAATACCA GTACGGGAAC ATATACATCT GCCTCTGATA CAGTGCACCT TGTGTATACC
TCATCCAGTT CATTTGCCAT TACCACTACT ACAGGCGCTC CGGTTTCCGG TACAAACATT
AATATCTGCG GTTCTATTGA CAGTACCTTT TTAGTGTCTC CGGGTTTTAC AGATTATAAA
TGGTATAAAA ACAGCACAAC AAATTTAGTG AGCAGTACAA ATTCGTTAAC GTTCACAAAT
GCTGTTTTAT CTGCTTCTGA AGGAACAGTT TCCTTTTTTG TTACCGCAAA AAATTCATCC
GGTTGTGATG TTTCAGCGCA GCAAAACGTC CGCAGAGATA ATTCTGTTGT AGTAGATCTG
GGGCCGGATA TATCTCCTTG TCTGGGTACT CCTGTAACAC TTTCATCACC TTCTTCTACT
CCTCCCAATG TTGTTATTTC CTATAGATGG AACACCAATG CCATTACACA AACAATCTCG
GTAAATACCA GCGGGAAATA TAAATTAACG ATTTCCAATC TTGGATCGAA ATGCAGAAAT
ACAGATTCTG TAAATGTTAC GTTTTTAACA GGTCCTTCTG TTACAATTTC AAAAGACACG
ACCATCTGTA AAAATACTTC TGTTCAGTTA AATGCCCAGG CCACCGGCAC CGGTACATAT
ACCTACAGCT GGTCTCCTGC AGCAGGCTTA TCCAACAGCT CAATCAGTAA TCCAATAGCA
ACACCGGTCA ATGAAGGACC AACGACTTAT ACGGTATCTG TAACAGGTTC TTCCGGTTGT
GGCAGCGGTA CCACCAAATC CACAAAGGTT ACTGTCCTTC CCGCCTATGC TACTGCCTAT
GGTTCTGTAG ATGCGGGCAA TGATACATCG ATCTGTTATT TATCAGGTGC TCAGCTTGCA
CCAACAACTA CATCGCTTTA TCCGGCCACC TATAGCTGGT CATGGAGCCC GGCAACAGGT
TTAAGCAGCA GCAGCATACA AAACCCAACG CTAACGTTAA CTACTCCGGG TATTCAGAAA
TATGTTGTTA CTGCTACCGA TGACAGGGGC TGTGCATACA AAGACTCTGT TAATGTTACC
AATTTGTCTG AACTTACGAC AACTACAAAT TTTCTGGATT CCACGATCTG TGCCGATACC
CCGATCCGGT TGTTTGCATT TGCCAGCGGC GGTTCATTAA CCGGTTATTC ATTTAATTTT
ACTCCTGCTA TTGACAGTGT CTCCGGAAAC ATATTGACGC TGTACCCGAT TGATTCCACC
TATCACATTC TGGTTTCTTC AACAGACAGT GATGGCTGCA CCAGCCCGGA AGTTGATGTT
ACAATCAAAG GGTACAGACC TTATGTTCAC ATCGCCAATG CGATGGATAC GATTGGATAT
GGCGGAAATC CATTAGTTCT TGTAGCGAAT ATCGCATCAA ACCCGGATGT TACTGTTGAC
TGGTATGAAC AATATACAGA TACTTATTTG TCTTCTGGAT TAACCTATAC GTCAACAACG
GATCAGGCAA TCTACGCCTT TGCTACAGAT AGTTATTACA CCTGTTTCAA CAGAGATTCT
GTTAGCATTA CCCACATTGA TGCAGACTTA CACGCACTGT TTATTCCGAA TGTGTTCTCA
CCTAAAGCAT CTAACCCTGA AAATCAACAC TTAAAAGTGT ATGGTACCTA TATACAGGAA
GAAGCTTTCA GTTTCCGTAT TTATAATCAA TGGGGTCAAT TGGTATATCA GACAAATTCT
TTTATTGAAG CCAATACCTT AGGCTGGTCA GGAGAATTTA AAGGAAATGA AGGCGGCCAA
TCAACCAATG TATATACCTA CACCCTCGAA GGTAAATTTT ATGACGGATT AGCCTTTAAT
AAAGCAGGTA CTGCAACCAT GCTGCGCTGA
 
Protein sequence
MLSSFICKRR IIYAHMRFYR QYIQHFFVCL LILTVSIRTY AAGITVSVVV NGNTVIPGPS 
KTVFVCKGGI YNLKSSNIAT PPPAGLPIYE WKNLDSTGAT LTGNQINTFN AGRWVSTIKY
YNTSTGTYTS ASDTVHLVYT SSSSFAITTT TGAPVSGTNI NICGSIDSTF LVSPGFTDYK
WYKNSTTNLV SSTNSLTFTN AVLSASEGTV SFFVTAKNSS GCDVSAQQNV RRDNSVVVDL
GPDISPCLGT PVTLSSPSST PPNVVISYRW NTNAITQTIS VNTSGKYKLT ISNLGSKCRN
TDSVNVTFLT GPSVTISKDT TICKNTSVQL NAQATGTGTY TYSWSPAAGL SNSSISNPIA
TPVNEGPTTY TVSVTGSSGC GSGTTKSTKV TVLPAYATAY GSVDAGNDTS ICYLSGAQLA
PTTTSLYPAT YSWSWSPATG LSSSSIQNPT LTLTTPGIQK YVVTATDDRG CAYKDSVNVT
NLSELTTTTN FLDSTICADT PIRLFAFASG GSLTGYSFNF TPAIDSVSGN ILTLYPIDST
YHILVSSTDS DGCTSPEVDV TIKGYRPYVH IANAMDTIGY GGNPLVLVAN IASNPDVTVD
WYEQYTDTYL SSGLTYTSTT DQAIYAFATD SYYTCFNRDS VSITHIDADL HALFIPNVFS
PKASNPENQH LKVYGTYIQE EAFSFRIYNQ WGQLVYQTNS FIEANTLGWS GEFKGNEGGQ
STNVYTYTLE GKFYDGLAFN KAGTATMLR