Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1790 |
Symbol | |
ID | 4184686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2098754 |
End bp | 2099626 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071789 |
Product | hypothetical protein |
Protein accession | YP_678399 |
Protein GI | 110638190 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0838562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACA TATGTTGCGC CTGTGCCATA CTGGTACAGG TATTGAGTTT TACTGTTACC GCACAAACAG TTTTACAACC CGGAGATGTG GCTGTTATCG GGTATAATTT CAAAGATCCG GATCAGTTTT CGTTTATCTT TTTGCGTGAA GTGGAAGCGG GTACAATTTT GCGCATCACA GACTGTGGAT ATGATGCAAC ACTTTCCGCA TTCCGTGTTG GCGAAGGTTT GCTTACGTAT ACTGTTCCTG CCGGTGGATT AAAAGCCGGT TCGGTAGTGA CTTATCCGGA TGATGCCGGT TTTGTAAGTC AGGGAATCAG CGGTTTTTTT GGTTTAACGG TTGATGGAGA TCAGCTGATC TTTTTTCAGG GAACATTTGT TACGCCAGCG TTCATATATG CGTTACATGT AATGACTGAA AGCTGGGCAG AGGCCATTGT CAATAACAAT ACCACGGCGC TGCCACCCGG CTTAACGGAT GGAGTCACGG CACACAGCTT TTCAAAAATT GTAAACAGCA GGCTTAATTG TACCGGAGTA GCCATTGAAC CAAGTCTCTT CCTGACTCAG GCTGCAGATG AGACAAGGTG GGAAAGGAGT AATGCAGACC GCGTTTCTCT ACCCGACATT ACCTGTGATT ATTCGCTATT AACGCTCAAA CATTCAGCAA CTGAAACACT TTTTGATTTC CACAGGAAAA TTCTTTCTGA CAGTAATTAT AAGGAGATTG TAGTTTATAC CGCCGATGGA AACCTATATT TTTCAACGCA GAGTCTTGAT GACGCATTAA ACGCAATTAT TAGAGAAAAA ATGTATATTT TTAAGGTGTG TTATCCAGAT CGGCTGGAAG TAGTAAAAGT AATACGTCAT TAA
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Protein sequence | MRNICCACAI LVQVLSFTVT AQTVLQPGDV AVIGYNFKDP DQFSFIFLRE VEAGTILRIT DCGYDATLSA FRVGEGLLTY TVPAGGLKAG SVVTYPDDAG FVSQGISGFF GLTVDGDQLI FFQGTFVTPA FIYALHVMTE SWAEAIVNNN TTALPPGLTD GVTAHSFSKI VNSRLNCTGV AIEPSLFLTQ AADETRWERS NADRVSLPDI TCDYSLLTLK HSATETLFDF HRKILSDSNY KEIVVYTADG NLYFSTQSLD DALNAIIREK MYIFKVCYPD RLEVVKVIRH
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