Gene CHU_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1790 
Symbol 
ID4184686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2098754 
End bp2099626 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content42% 
IMG OID638071789 
Producthypothetical protein 
Protein accessionYP_678399 
Protein GI110638190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0838562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACA TATGTTGCGC CTGTGCCATA CTGGTACAGG TATTGAGTTT TACTGTTACC 
GCACAAACAG TTTTACAACC CGGAGATGTG GCTGTTATCG GGTATAATTT CAAAGATCCG
GATCAGTTTT CGTTTATCTT TTTGCGTGAA GTGGAAGCGG GTACAATTTT GCGCATCACA
GACTGTGGAT ATGATGCAAC ACTTTCCGCA TTCCGTGTTG GCGAAGGTTT GCTTACGTAT
ACTGTTCCTG CCGGTGGATT AAAAGCCGGT TCGGTAGTGA CTTATCCGGA TGATGCCGGT
TTTGTAAGTC AGGGAATCAG CGGTTTTTTT GGTTTAACGG TTGATGGAGA TCAGCTGATC
TTTTTTCAGG GAACATTTGT TACGCCAGCG TTCATATATG CGTTACATGT AATGACTGAA
AGCTGGGCAG AGGCCATTGT CAATAACAAT ACCACGGCGC TGCCACCCGG CTTAACGGAT
GGAGTCACGG CACACAGCTT TTCAAAAATT GTAAACAGCA GGCTTAATTG TACCGGAGTA
GCCATTGAAC CAAGTCTCTT CCTGACTCAG GCTGCAGATG AGACAAGGTG GGAAAGGAGT
AATGCAGACC GCGTTTCTCT ACCCGACATT ACCTGTGATT ATTCGCTATT AACGCTCAAA
CATTCAGCAA CTGAAACACT TTTTGATTTC CACAGGAAAA TTCTTTCTGA CAGTAATTAT
AAGGAGATTG TAGTTTATAC CGCCGATGGA AACCTATATT TTTCAACGCA GAGTCTTGAT
GACGCATTAA ACGCAATTAT TAGAGAAAAA ATGTATATTT TTAAGGTGTG TTATCCAGAT
CGGCTGGAAG TAGTAAAAGT AATACGTCAT TAA
 
Protein sequence
MRNICCACAI LVQVLSFTVT AQTVLQPGDV AVIGYNFKDP DQFSFIFLRE VEAGTILRIT 
DCGYDATLSA FRVGEGLLTY TVPAGGLKAG SVVTYPDDAG FVSQGISGFF GLTVDGDQLI
FFQGTFVTPA FIYALHVMTE SWAEAIVNNN TTALPPGLTD GVTAHSFSKI VNSRLNCTGV
AIEPSLFLTQ AADETRWERS NADRVSLPDI TCDYSLLTLK HSATETLFDF HRKILSDSNY
KEIVVYTADG NLYFSTQSLD DALNAIIREK MYIFKVCYPD RLEVVKVIRH